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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170024481
BCQL01066731
73133
Bacteroidota
TAA
Leu
>WENV170024779
BCQL01124335
156076
Bacteroidota
TAC
Val
>WENV170024905
BCQL01155913
156076
Bacteroidota
TAC
Val
>WENV170024509
BCQL01070343
288475
Bacteroidota
GCC
Gly
>WENV170024510
BCQL01070343
288475
Bacteroidota
GCC
Gly
>WENV170024511
BCQL01070343
288475
Bacteroidota
GCC
Gly
>WENV170024513
BCQL01070343
288475
Bacteroidota
GCC
Gly
>WENV170024022
BCQL01015698
120026
Bacteroidota
GTA
Tyr
>WENV170025187
BCQL01245895
281336
Bacteroidota
TCC
Gly
>WENV170024023
BCQL01015698
364431
Bacteroidota
TCC
Gly
>WENV170025422
BCQL01329569
281190
Bacteroidota
CAT
Met
>WENV170024749
BCQL01115788
281190
Bacteroidota
CAT
Met
>WENV170024399
BCQL01053745
282835
Bacteroidota
TCC
Gly
>WENV170024457
BCQL01063271
155786
Bacteroidota
TGG
Pro
>WENV170025397
BCQL01315105
155808
Bacteroidota
TGG
Pro
>WENV170025125
BCQL01224076
155808
Bacteroidota
TGG
Pro
>WENV170024806
BCQL01132201
155808
Bacteroidota
TGG
Pro
>WENV170024444
BCQL01061856
229336
Bacteroidota
GGC
Ala
>WENV170024448
BCQL01062291
366169
Bacteroidota
GAA
Phe
>WENV170025124
BCQL01224076
15274
Bacteroidota
GCT
Ser
>WENV170023808
BCQL01004335
185890
Bacteroidota
TGC
Ala
>WENV170024531
BCQL01071300
193718
Bacteroidota
GTC
Asp
>WENV170024822
BCQL01136746
231598
Bacteroidota
GGC
Ala
>WENV170024595
BCQL01081504
282831
Bacteroidota
TTT
Lys
>WENV170024596
BCQL01081504
282831
Bacteroidota
TTT
Lys
>WENV170025443
BCQL01339251
282831
Bacteroidota
TTT
Lys
>WENV170024720
BCQL01109150
118418
Bacteroidota
TAG
Leu
>WENV170024605
BCQL01083284
436346
Bacteroidota
GGT
Thr
>WENV170025307
BCQL01282292
492673
Bacteroidota
GCA
Cys
>WENV170024201
BCQL01029938
403841
Bacteroidota
GCC
Gly
>WENV170024250
BCQL01033081
56162
Bacteroidota
TGA
Ser
>WENV170024202
BCQL01029938
77278
Bacteroidota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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