This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170108173
CECA01015364
280500
Bacillota
TGC
Ala
>WENV170108304
CECA01022888
349107
Bacillota
GCC
Gly
>WENV170108440
CECA01029913
349107
Bacillota
GCC
Gly
>WENV170108225
CECA01018488
238915
Bacillota
CAT
Met
>WENV170108050
CECA01008250
405363
Bacillota
GCA
Cys
>WENV170108439
CECA01029913
280428
Bacillota
GAA
Phe
>WENV170108731
CECA01043810
280428
Bacillota
GAA
Phe
>WENV170108683
CECA01040954
229015
Bacillota
GTG
His
>WENV170108409
CECA01028650
179917
Bacillota
CAT
Met
>WENV170108437
CECA01029913
280466
Bacillota
TAC
Val
>WENV170108305
CECA01022888
280466
Bacillota
TAC
Val
>WENV170109144
CECA01063945
426579
Bacillota
GTT
Asn
>WENV170109118
CECA01062561
280492
Bacillota
CTT
Lys
>WENV170108734
CECA01043914
280492
Bacillota
CTT
Lys
>WENV170108136
CECA01013553
175842
Bacillota
CAC
Val
>WENV170108700
CECA01042005
291629
Bacillota
CCA
Trp
>WENV170109247
CECA01070405
323166
Bacillota
TAC
Val
>WENV170108475
CECA01031219
179563
Bacillota
GAT
Ile
>WENV170109025
CECA01058016
73664
Bacillota
CAG
Leu
>WENV170109064
CECA01060093
280447
Bacillota
GAC
Val
>WENV170108678
CECA01040946
280447
Bacillota
GAC
Val
>WENV170108302
CECA01022598
280447
Bacillota
GAC
Val
>WENV170109198
CECA01068490
5692
Bacillota
GCT
Ser
>WENV170108321
CECA01023747
5692
Bacillota
GCT
Ser
>WENV170108698
CECA01042005
186123
Bacillota
GTC
Asp
>WENV170109010
CECA01057329
284723
Bacillota
TAC
Val
>WENV170108406
CECA01028650
284723
Bacillota
TAC
Val
>WENV170108034
CECA01006480
73009
Bacillota
CAG
Leu
>WENV170108222
CECA01018480
73009
Bacillota
CAG
Leu
>WENV170108860
CECA01050084
189473
Bacillota
GAT
Ile
>WENV170108556
CECA01036093
291581
Bacillota
CGG
Pro
>WENV170107939
CECA01001056
291581
Bacillota
CGG
Pro
>WENV170109128
CECA01063452
175859
Bacillota
TCT
Arg
>WENV170108576
CECA01037090
175831
Bacillota
ACG
Arg
>WENV170108474
CECA01031219
353153
Bacillota
TGC
Ala
>WENV170108381
CECA01026992
455259
Bacillota
TTC
Glu
>WENV170108682
CECA01040954
179810
Bacillota
TCT
Arg
>WENV170108085
CECA01010897
27216
Bacillota
GCT
Ser
>WENV170108940
CECA01054491
480322
Bacillota
CTG
Gln
>WENV170108555
CECA01036093
480322
Bacillota
CTG
Gln
>WENV170107938
CECA01001056
480322
Bacillota
CTG
Gln
>WENV170108335
CECA01024880
175868
Bacillota
GTT
Asn
>WENV170108781
CECA01045724
175868
Bacillota
GTT
Asn
>WENV170109124
CECA01063203
175868
Bacillota
GTT
Asn
>WENV170108780
CECA01045724
398854
Bacillota
CTC
Glu
>WENV170109327
CECA01073364
291576
Bacillota
CCC
Gly
>WENV170109213
CECA01069609
291576
Bacillota
CCC
Gly
>WENV170108782
CECA01046191
480324
Bacillota
TTG
Gln
>WENV170108080
CECA01010453
480324
Bacillota
TTG
Gln
>WENV170109157
CECA01065585
480324
Bacillota
TTG
Gln
>WENV170108314
CECA01023709
175899
Bacillota
GTC
Asp
>WENV170108160
CECA01014754
303718
Bacillota
TGT
Thr
>WENV170107958
CECA01002313
303718
Bacillota
TGT
Thr
>WENV170109024
CECA01058016
56079
Bacillota
AAG
Leu
>WENV170109200
CECA01068508
117745
Bacillota
GTA
Tyr
>WENV170109190
CECA01067853
280444
Bacillota
GGT
Thr
>WENV170108963
CECA01055402
280444
Bacillota
GGT
Thr
>WENV170108847
CECA01049401
280444
Bacillota
GGT
Thr
>WENV170108540
CECA01034950
280444
Bacillota
GGT
Thr
>WENV170108319
CECA01023732
280444
Bacillota
GGT
Thr
>WENV170108819
CECA01047537
342104
Bacillota
TAC
Val
>WENV170108776
CECA01045714
342104
Bacillota
TAC
Val
>WENV170108120
CECA01012890
179755
Bacillota
CCG
Arg
>WENV170108127
CECA01013086
46835
Bacillota
TAA
Leu
>WENV170108211
CECA01017869
398832
Bacillota
TTC
Glu
>WENV170108164
CECA01014754
398832
Bacillota
TTC
Glu
>WENV170109104
CECA01061960
280462
Bacillota
GAA
Phe
>WENV170109080
CECA01060799
398852
Bacillota
CTC
Glu
>WENV170108814
CECA01047135
398852
Bacillota
CTC
Glu
>WENV170109189
CECA01067853
175849
Bacillota
GTC
Asp
>WENV170108846
CECA01049401
175849
Bacillota
GTC
Asp
>WENV170108438
CECA01029913
175849
Bacillota
GTC
Asp
>WENV170108213
CECA01017873
280463
Bacillota
TTT
Lys
>WENV170109301
CECA01071742
405393
Bacillota
GCC
Gly
>WENV170108699
CECA01042005
405393
Bacillota
GCC
Gly
>WENV170109197
CECA01068490
56074
Bacillota
TGA
Ser
>WENV170108320
CECA01023747
56074
Bacillota
TGA
Ser
>WENV170108880
CECA01051309
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK