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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170112214
CEGE01000001
73501
Gammaproteobacteria
GAG
Leu
>WENV170112236
CEGE01000149
284693
Gammaproteobacteria
TTC
Glu
>WENV170112241
CEGE01000195
73498
Gammaproteobacteria
CAA
Leu
>WENV170112260
CEGE01000434
178541
Gammaproteobacteria
CGG
Pro
>WENV170112263
CEGE01000490
89769
Gammaproteobacteria
CAG
Leu
>WENV170112265
CEGE01000490
89769
Gammaproteobacteria
CAG
Leu
>WENV170112266
CEGE01000501
335783
Gammaproteobacteria
GTT
Asn
>WENV170112267
CEGE01000501
335783
Gammaproteobacteria
GTT
Asn
>WENV170112270
CEGE01000558
197233
Gammaproteobacteria
CAT
Met
>WENV170112271
CEGE01000558
371341
Gammaproteobacteria
GTT
Asn
>WENV170112272
CEGE01000558
371341
Gammaproteobacteria
GTT
Asn
>WENV170112273
CEGE01000558
371341
Gammaproteobacteria
GTT
Asn
>WENV170112275
CEGE01000708
243308
Gammaproteobacteria
TGG
Pro
>WENV170112276
CEGE01000799
178544
Gammaproteobacteria
CAT
Met
>WENV170112277
CEGE01000799
118219
Gammaproteobacteria
TAG
Leu
>WENV170112278
CEGE01000799
400402
Gammaproteobacteria
TTG
Gln
>WENV170112279
CEGE01000799
400402
Gammaproteobacteria
TTG
Gln
>WENV170112280
CEGE01000799
73502
Gammaproteobacteria
CAG
Leu
>WENV170112289
CEGE01001183
280812
Gammaproteobacteria
GAA
Phe
>WENV170112290
CEGE01001188
178535
Gammaproteobacteria
CCT
Arg
>WENV170112293
CEGE01001234
20410
Gammaproteobacteria
TGA
Ser
>WENV170112295
CEGE01001267
335783
Gammaproteobacteria
GTT
Asn
>WENV170112301
CEGE01001325
280812
Gammaproteobacteria
GAA
Phe
>WENV170112303
CEGE01001393
184457
Gammaproteobacteria
GGG
Pro
>WENV170112304
CEGE01001396
73055
Gammaproteobacteria
TAA
Leu
>WENV170112308
CEGE01001525
283282
Gammaproteobacteria
TTT
Lys
>WENV170112309
CEGE01001525
283282
Gammaproteobacteria
TTT
Lys
>WENV170112312
CEGE01001605
8667
Gammaproteobacteria
GCT
Ser
>WENV170112313
CEGE01001605
190706
Gammaproteobacteria
ACG
Arg
>WENV170112314
CEGE01001605
190706
Gammaproteobacteria
ACG
Arg
>WENV170112318
CEGE01001680
140861
Gammaproteobacteria
GTA
Tyr
>WENV170112320
CEGE01001680
443066
Gammaproteobacteria
GGT
Thr
>WENV170112322
CEGE01001726
176868
Gammaproteobacteria
CAT
Met
>WENV170112327
CEGE01001775
334421
Gammaproteobacteria
TGT
Thr
>WENV170112329
CEGE01001775
402011
Gammaproteobacteria
TCC
Gly
>WENV170112330
CEGE01001775
421507
Gammaproteobacteria
GGT
Thr
>WENV170112331
CEGE01001848
180904
Gammaproteobacteria
CCA
Trp
>WENV170112333
CEGE01001849
180904
Gammaproteobacteria
CCA
Trp
>WENV170112336
CEGE01001911
178539
Gammaproteobacteria
GAC
Val
>WENV170112338
CEGE01002153
20637
Gammaproteobacteria
TGA
Ser
>WENV170112339
CEGE01002154
20637
Gammaproteobacteria
TGA
Ser
>WENV170112340
CEGE01002155
20637
Gammaproteobacteria
TGA
Ser
>WENV170112351
CEGE01002790
218621
Gammaproteobacteria
TGG
Pro
>WENV170112352
CEGE01002790
218621
Gammaproteobacteria
TGG
Pro
>WENV170112353
CEGE01002797
285824
Gammaproteobacteria
GTT
Asn
>WENV170112357
CEGE01003072
8609
Gammaproteobacteria
GCT
Ser
>WENV170112363
CEGE01003715
178549
Gammaproteobacteria
GTT
Asn
>WENV170112364
CEGE01003731
284693
Gammaproteobacteria
TTC
Glu
>WENV170112365
CEGE01003731
284693
Gammaproteobacteria
TTC
Glu
>WENV170112375
CEGE01004021
176478
Gammaproteobacteria
CAT
Met
>WENV170112385
CEGE01004580
118682
Gammaproteobacteria
GTA
Tyr
>WENV170112386
CEGE01004580
118682
Gammaproteobacteria
GTA
Tyr
>WENV170112387
CEGE01004580
118682
Gammaproteobacteria
GTA
Tyr
>WENV170112390
CEGE01004674
218621
Gammaproteobacteria
TGG
Pro
>WENV170112393
CEGE01004828
178538
Gammaproteobacteria
GTC
Asp
>WENV170112394
CEGE01004828
178538
Gammaproteobacteria
GTC
Asp
>WENV170112396
CEGE01004828
178538
Gammaproteobacteria
GTC
Asp
>WENV170112397
CEGE01004886
56412
Gammaproteobacteria
GGA
Ser
>WENV170112402
CEGE01005175
283283
Gammaproteobacteria
TAC
Val
>WENV170112404
CEGE01005502
281282
Gammaproteobacteria
TTC
Glu
>WENV170112406
CEGE01005707
57340
Gammaproteobacteria
GGA
Ser
>WENV170112407
CEGE01005781
178540
Gammaproteobacteria
TGG
Pro
>WENV170112411
CEGE01005968
20968
Gammaproteobacteria
TGA
Ser
>WENV170112422
CEGE01007527
328691
Gammaproteobacteria
GGT
Thr
>WENV170112425
CEGE01007727
280807
Gammaproteobacteria
CAT
Met
>WENV170112426
CEGE01007834
197991
Gammaproteobacteria
ACG
Arg
>WENV170112430
CEGE01008294
331709
Gammaproteobacteria
GCC
Gly
>WENV170112432
CEGE01009278
481036
Gammaproteobacteria
GCA
Cys
>WENV170112440
CEGE01013612
285825
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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