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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170130916
CENR01067038
482973
Alphaproteobacteria
TCC
Gly
>WENV170130908
CENR01065173
282745
Alphaproteobacteria
TAC
Val
>WENV170130628
CENR01017659
335303
Alphaproteobacteria
TGC
Ala
>WENV170130918
CENR01067348
73374
Alphaproteobacteria
CAG
Leu
>WENV170130836
CENR01030496
140876
Alphaproteobacteria
>WENV170130501
CENR01004257
20437
Alphaproteobacteria
GGA
Ser
>WENV170130641
CENR01018992
201940
Alphaproteobacteria
CAT
Met
>WENV170130480
CENR01001276
400518
Alphaproteobacteria
GAA
Phe
>WENV170130536
CENR01007539
178731
Alphaproteobacteria
GTC
Asp
>WENV170130910
CENR01065575
400516
Alphaproteobacteria
TTG
Gln
>WENV170130530
CENR01006479
178734
Alphaproteobacteria
TGG
Pro
>WENV170130674
CENR01022733
340918
Alphaproteobacteria
CGT
Thr
>WENV170130543
CENR01009392
121250
Alphaproteobacteria
TAG
Leu
>WENV170130529
CENR01006479
178733
Alphaproteobacteria
CAT
Met
>WENV170130656
CENR01020751
427571
Alphaproteobacteria
GCC
Gly
>WENV170130486
CENR01001871
195451
Alphaproteobacteria
GAC
Val
>WENV170130625
CENR01017505
176153
Alphaproteobacteria
CAT
Met
>WENV170130661
CENR01021277
178503
Alphaproteobacteria
GGG
Pro
>WENV170130596
CENR01015334
283510
Alphaproteobacteria
TTT
Lys
>WENV170130550
CENR01009794
192275
Alphaproteobacteria
GTG
His
>WENV170130476
CENR01000949
400517
Alphaproteobacteria
GGT
Thr
>WENV170130495
CENR01003587
481098
Alphaproteobacteria
CTG
Gln
>WENV170130907
CENR01065011
400029
Alphaproteobacteria
GGT
Thr
>WENV170130517
CENR01005567
178736
Alphaproteobacteria
CCT
Arg
>WENV170130856
CENR01041619
281676
Alphaproteobacteria
TAC
Val
>WENV170130739
CENR01026818
282981
Alphaproteobacteria
CCA
Trp
>WENV170130610
CENR01016874
13340
Alphaproteobacteria
GCT
Ser
>WENV170130708
CENR01025122
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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