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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170162090
CEOM01001213
281659
Alphaproteobacteria
TGC
Ala
>WENV170162227
CEOM01012052
140876
Alphaproteobacteria
>WENV170162269
CEOM01016155
481268
Alphaproteobacteria
TCC
Gly
>WENV170162309
CEOM01019187
201940
Alphaproteobacteria
CAT
Met
>WENV170162456
CEOM01032433
280788
Alphaproteobacteria
TTT
Lys
>WENV170162480
CEOM01034975
400544
Alphaproteobacteria
GGT
Thr
>WENV170162945
CEOM01079547
398994
Alphaproteobacteria
GTT
Asn
>WENV170163138
CEOM01099276
398994
Alphaproteobacteria
GTT
Asn
>WENV170163316
CEOM01120171
408543
Alphaproteobacteria
GAC
Val
>WENV170163371
CEOM01125260
29702
Alphaproteobacteria
GGA
Ser
>WENV170163395
CEOM01127770
197241
Alphaproteobacteria
GGG
Pro
>WENV170163446
CEOM01132818
487436
Alphaproteobacteria
TCC
Gly
>WENV170163455
CEOM01133498
197241
Alphaproteobacteria
GGG
Pro
>WENV170163470
CEOM01135238
291892
Alphaproteobacteria
TAC
Val
>WENV170163477
CEOM01135725
408543
Alphaproteobacteria
GAC
Val
>WENV170163590
CEOM01151252
75222
Alphaproteobacteria
GAG
Leu
>WENV170163881
CEOM01183035
281650
Alphaproteobacteria
CCA
Trp
>WENV170163962
CEOM01192207
201940
Alphaproteobacteria
CAT
Met
>WENV170164171
CEOM01204507
305403
Alphaproteobacteria
>WENV170164230
CEOM01206848
178237
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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