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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170201162
CEPQ01000609
296698
Alphaproteobacteria
CGC
Ala
>WENV170201332
CEPQ01012324
20437
Alphaproteobacteria
GGA
Ser
>WENV170201726
CEPQ01047762
201940
Alphaproteobacteria
CAT
Met
>WENV170202093
CEPQ01115594
178731
Alphaproteobacteria
GTC
Asp
>WENV170201266
CEPQ01005249
400516
Alphaproteobacteria
TTG
Gln
>WENV170201900
CEPQ01058078
400384
Alphaproteobacteria
TTC
Glu
>WENV170201859
CEPQ01054348
232927
Alphaproteobacteria
CAT
Met
>WENV170201352
CEPQ01014592
178734
Alphaproteobacteria
TGG
Pro
>WENV170201492
CEPQ01025532
121250
Alphaproteobacteria
TAG
Leu
>WENV170201351
CEPQ01014592
178733
Alphaproteobacteria
CAT
Met
>WENV170202158
CEPQ01124453
192275
Alphaproteobacteria
GTG
His
>WENV170202096
CEPQ01116293
400517
Alphaproteobacteria
GGT
Thr
>WENV170201526
CEPQ01028133
481098
Alphaproteobacteria
CTG
Gln
>WENV170202000
CEPQ01096647
282981
Alphaproteobacteria
CCA
Trp
>WENV170201856
CEPQ01054348
353624
Alphaproteobacteria
CCA
Trp
>WENV170201293
CEPQ01007528
481099
Alphaproteobacteria
TCC
Gly
>WENV170201343
CEPQ01014086
29739
Alphaproteobacteria
CGA
Ser
>WENV170202080
CEPQ01113118
282980
Alphaproteobacteria
TGT
Thr
>WENV170201297
CEPQ01008129
13340
Alphaproteobacteria
GCT
Ser
>WENV170202077
CEPQ01112463
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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