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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170247391
CEQQ01034476
296698
Alphaproteobacteria
CGC
Ala
>WENV170248671
CEQQ01153142
400518
Alphaproteobacteria
GAA
Phe
>WENV170248275
CEQQ01114290
303339
Alphaproteobacteria
GGC
Ala
>WENV170247949
CEQQ01081290
121250
Alphaproteobacteria
TAG
Leu
>WENV170247892
CEQQ01075994
102146
Alphaproteobacteria
GTA
Tyr
>WENV170247831
CEQQ01071083
192275
Alphaproteobacteria
GTG
His
>WENV170248751
CEQQ01194960
400544
Alphaproteobacteria
GGT
Thr
>WENV170248380
CEQQ01125725
481098
Alphaproteobacteria
CTG
Gln
>WENV170248144
CEQQ01099200
481098
Alphaproteobacteria
CTG
Gln
>WENV170248313
CEQQ01119093
481099
Alphaproteobacteria
TCC
Gly
>WENV170247345
CEQQ01031132
428327
Alphaproteobacteria
GCC
Gly
>WENV170248163
CEQQ01101382
480900
Alphaproteobacteria
GCA
Cys
>WENV170247129
CEQQ01017847
308123
Alphaproteobacteria
CCA
Trp
>WENV170247372
CEQQ01032956
13340
Alphaproteobacteria
GCT
Ser
>WENV170247566
CEQQ01047137
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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