This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170278501
CERQ01103252
360947
Alphaproteobacteria
TTT
Lys
>WENV170278753
CERQ01125139
77010
Alphaproteobacteria
GAG
Leu
>WENV170277830
CERQ01028178
296698
Alphaproteobacteria
CGC
Ala
>WENV170277968
CERQ01041501
399001
Alphaproteobacteria
GAC
Val
>WENV170277925
CERQ01037588
282745
Alphaproteobacteria
TAC
Val
>WENV170278766
CERQ01125758
481048
Alphaproteobacteria
GCA
Cys
>WENV170278008
CERQ01045104
424450
Alphaproteobacteria
GGT
Thr
>WENV170277954
CERQ01040533
29596
Alphaproteobacteria
GCT
Ser
>WENV170278187
CERQ01062769
178050
Alphaproteobacteria
GTG
His
>WENV170277965
CERQ01041161
337513
Alphaproteobacteria
TGT
Thr
>WENV170278995
CERQ01208796
193463
Alphaproteobacteria
CCT
Arg
>WENV170278050
CERQ01048634
375285
Alphaproteobacteria
TAC
Val
>WENV170278778
CERQ01126379
201940
Alphaproteobacteria
CAT
Met
>WENV170278514
CERQ01105372
284697
Alphaproteobacteria
GAA
Phe
>WENV170278183
CERQ01062316
288727
Alphaproteobacteria
>WENV170277952
CERQ01040441
178731
Alphaproteobacteria
GTC
Asp
>WENV170278822
CERQ01136691
400516
Alphaproteobacteria
TTG
Gln
>WENV170278110
CERQ01054638
280784
Alphaproteobacteria
TGC
Ala
>WENV170277761
CERQ01020472
75222
Alphaproteobacteria
GAG
Leu
>WENV170278621
CERQ01117437
486348
Alphaproteobacteria
GCA
Cys
>WENV170278017
CERQ01045625
282748
Alphaproteobacteria
CGT
Thr
>WENV170279035
CERQ01222223
100096
Alphaproteobacteria
TAA
Leu
>WENV170278592
CERQ01114238
25643
Alphaproteobacteria
GGA
Ser
>WENV170277783
CERQ01022781
282977
Alphaproteobacteria
CAT
Met
>WENV170278897
CERQ01174406
178734
Alphaproteobacteria
TGG
Pro
>WENV170278601
CERQ01115110
121250
Alphaproteobacteria
TAG
Leu
>WENV170279019
CERQ01216748
427571
Alphaproteobacteria
GCC
Gly
>WENV170278386
CERQ01086924
427571
Alphaproteobacteria
GCC
Gly
>WENV170277738
CERQ01018599
141247
Alphaproteobacteria
CAA
Leu
>WENV170277719
CERQ01016516
231082
Alphaproteobacteria
ACG
Arg
>WENV170277942
CERQ01039460
29610
Alphaproteobacteria
TGA
Ser
>WENV170278925
CERQ01182549
398998
Alphaproteobacteria
TTG
Gln
>WENV170277881
CERQ01032865
481098
Alphaproteobacteria
CTG
Gln
>WENV170277821
CERQ01027005
282658
Alphaproteobacteria
CGT
Thr
>WENV170278591
CERQ01114213
13331
Alphaproteobacteria
GCT
Ser
>WENV170278756
CERQ01125270
488318
Alphaproteobacteria
TCC
Gly
>WENV170278698
CERQ01121139
398994
Alphaproteobacteria
GTT
Asn
>WENV170278485
CERQ01100078
280785
Alphaproteobacteria
CCA
Trp
>WENV170278546
CERQ01109296
282981
Alphaproteobacteria
CCA
Trp
>WENV170278777
CERQ01126306
282981
Alphaproteobacteria
CCA
Trp
>WENV170278754
CERQ01125139
481099
Alphaproteobacteria
TCC
Gly
>WENV170277980
CERQ01042247
428327
Alphaproteobacteria
GCC
Gly
>WENV170279098
CERQ01238742
29739
Alphaproteobacteria
CGA
Ser
>WENV170278793
CERQ01126445
29739
Alphaproteobacteria
CGA
Ser
>WENV170278758
CERQ01125350
332802
Alphaproteobacteria
GGC
Ala
>WENV170277653
CERQ01009408
13340
Alphaproteobacteria
GCT
Ser
>WENV170278721
CERQ01123008
73523
Alphaproteobacteria
CAG
Leu
>WENV170277673
CERQ01011852
366050
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK