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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170299487
CESG01038055
158246
Gammaproteobacteria
GTC
Asp
>WENV170300539
CESG01133185
331330
Gammaproteobacteria
TAC
Val
>WENV170299598
CESG01044567
123265
Gammaproteobacteria
GAG
Leu
>WENV170299880
CESG01069712
297858
Gammaproteobacteria
TGC
Ala
>WENV170298965
CESG01004100
178164
Gammaproteobacteria
GAT
Ile
>WENV170299780
CESG01061058
318157
Gammaproteobacteria
GTT
Asn
>WENV170299117
CESG01014161
118218
Gammaproteobacteria
TAG
Leu
>WENV170300138
CESG01096214
328691
Gammaproteobacteria
GGT
Thr
>WENV170300319
CESG01113545
20618
Gammaproteobacteria
GGA
Ser
>WENV170300242
CESG01107108
197233
Gammaproteobacteria
CAT
Met
>WENV170300135
CESG01096214
284022
Gammaproteobacteria
TGT
Thr
>WENV170300614
CESG01138518
284022
Gammaproteobacteria
TGT
Thr
>WENV170299919
CESG01072543
218635
Gammaproteobacteria
GAC
Val
>WENV170300336
CESG01114799
292194
Gammaproteobacteria
GGT
Thr
>WENV170299921
CESG01072581
480653
Gammaproteobacteria
GCA
Cys
>WENV170298949
CESG01002909
284693
Gammaproteobacteria
TTC
Glu
>WENV170300257
CESG01108902
73501
Gammaproteobacteria
GAG
Leu
>WENV170299389
CESG01030002
221668
Gammaproteobacteria
ACG
Arg
>WENV170299710
CESG01056221
178535
Gammaproteobacteria
CCT
Arg
>WENV170299388
CESG01030002
13452
Gammaproteobacteria
GCT
Ser
>WENV170300026
CESG01085984
20410
Gammaproteobacteria
TGA
Ser
>WENV170298941
CESG01002484
73498
Gammaproteobacteria
CAA
Leu
>WENV170300407
CESG01122464
73498
Gammaproteobacteria
CAA
Leu
>WENV170299402
CESG01030732
480516
Gammaproteobacteria
GCA
Cys
>WENV170299684
CESG01053210
197498
Gammaproteobacteria
TGG
Pro
>WENV170300506
CESG01132311
46836
Gammaproteobacteria
TAA
Leu
>WENV170300225
CESG01105794
118413
Gammaproteobacteria
TAG
Leu
>WENV170300211
CESG01104997
74048
Gammaproteobacteria
CAA
Leu
>WENV170299293
CESG01023920
306288
Gammaproteobacteria
GCC
Gly
>WENV170299808
CESG01063042
491391
Gammaproteobacteria
GCA
Cys
>WENV170300009
CESG01082585
177028
Gammaproteobacteria
CAT
Met
>WENV170298912
CESG01000013
180680
Gammaproteobacteria
GAC
Val
>WENV170299360
CESG01027825
176301
Gammaproteobacteria
GAT
Ile
>WENV170299032
CESG01007900
176301
Gammaproteobacteria
GAT
Ile
>WENV170299536
CESG01040680
180678
Gammaproteobacteria
CCG
Arg
>WENV170299283
CESG01023319
285547
Gammaproteobacteria
TTG
Gln
>WENV170300289
CESG01111687
402011
Gammaproteobacteria
TCC
Gly
>WENV170299457
CESG01035852
198943
Gammaproteobacteria
CAT
Met
>WENV170300775
CESG01176365
286980
Gammaproteobacteria
TTT
Lys
>WENV170299044
CESG01008630
176478
Gammaproteobacteria
CAT
Met
>WENV170299355
CESG01027533
81474
Gammaproteobacteria
CAG
Leu
>WENV170299305
CESG01024771
186591
Gammaproteobacteria
ACG
Arg
>WENV170299845
CESG01066814
282902
Gammaproteobacteria
TGT
Thr
>WENV170301005
CESG01233881
178533
Gammaproteobacteria
GGG
Pro
>WENV170299209
CESG01018539
180679
Gammaproteobacteria
CCA
Trp
>WENV170299061
CESG01009474
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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