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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170308086
CESK01075504
190614
Alphaproteobacteria
TGG
Pro
>WENV170307741
CESK01001151
178497
Alphaproteobacteria
CCG
Arg
>WENV170308007
CESK01043821
29841
Alphaproteobacteria
GGA
Ser
>WENV170307915
CESK01026975
193463
Alphaproteobacteria
CCT
Arg
>WENV170307782
CESK01007018
20437
Alphaproteobacteria
GGA
Ser
>WENV170307862
CESK01017867
201940
Alphaproteobacteria
CAT
Met
>WENV170307808
CESK01009815
201940
Alphaproteobacteria
CAT
Met
>WENV170307829
CESK01013449
400518
Alphaproteobacteria
GAA
Phe
>WENV170307755
CESK01003779
400518
Alphaproteobacteria
GAA
Phe
>WENV170308077
CESK01073444
100185
Alphaproteobacteria
GAG
Leu
>WENV170307840
CESK01014661
288727
Alphaproteobacteria
>WENV170308078
CESK01073451
400514
Alphaproteobacteria
TTG
Gln
>WENV170307920
CESK01028158
183632
Alphaproteobacteria
GGG
Pro
>WENV170307892
CESK01021597
121250
Alphaproteobacteria
TAG
Leu
>WENV170307977
CESK01040017
121250
Alphaproteobacteria
TAG
Leu
>WENV170307737
CESK01000442
427571
Alphaproteobacteria
GCC
Gly
>WENV170307744
CESK01001834
195451
Alphaproteobacteria
GAC
Val
>WENV170308071
CESK01071491
100184
Alphaproteobacteria
CAG
Leu
>WENV170307957
CESK01037079
178503
Alphaproteobacteria
GGG
Pro
>WENV170307942
CESK01035289
283510
Alphaproteobacteria
TTT
Lys
>WENV170307895
CESK01021849
192275
Alphaproteobacteria
GTG
His
>WENV170307742
CESK01001604
192275
Alphaproteobacteria
GTG
His
>WENV170307968
CESK01038901
400517
Alphaproteobacteria
GGT
Thr
>WENV170307984
CESK01040566
400517
Alphaproteobacteria
GGT
Thr
>WENV170307797
CESK01008522
281650
Alphaproteobacteria
CCA
Trp
>WENV170307814
CESK01010478
481098
Alphaproteobacteria
CTG
Gln
>WENV170307866
CESK01018849
481098
Alphaproteobacteria
CTG
Gln
>WENV170307794
CESK01008228
403581
Alphaproteobacteria
TTG
Gln
>WENV170307825
CESK01012889
178736
Alphaproteobacteria
CCT
Arg
>WENV170307976
CESK01039998
399000
Alphaproteobacteria
TTC
Glu
>WENV170307889
CESK01021264
282981
Alphaproteobacteria
CCA
Trp
>WENV170307762
CESK01004269
481099
Alphaproteobacteria
TCC
Gly
>WENV170308006
CESK01043062
480900
Alphaproteobacteria
GCA
Cys
>WENV170307907
CESK01025043
190609
Alphaproteobacteria
TCT
Arg
>WENV170307990
CESK01041289
398996
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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