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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170311913
CESM01201102
284706
Gammaproteobacteria
GTT
Asn
>WENV170312581
CESM01328148
297858
Gammaproteobacteria
TGC
Ala
>WENV170312349
CESM01234780
179284
Gammaproteobacteria
CAT
Met
>WENV170313019
CESM01507279
281276
Gammaproteobacteria
GGT
Thr
>WENV170312326
CESM01234124
178175
Gammaproteobacteria
ACG
Arg
>WENV170309997
CESM01005750
292194
Gammaproteobacteria
GGT
Thr
>WENV170311647
CESM01166984
281282
Gammaproteobacteria
TTC
Glu
>WENV170310587
CESM01052599
74240
Gammaproteobacteria
CAA
Leu
>WENV170310159
CESM01017035
13452
Gammaproteobacteria
GCT
Ser
>WENV170312910
CESM01476103
292006
Gammaproteobacteria
TGC
Ala
>WENV170310237
CESM01022759
291402
Gammaproteobacteria
GTG
His
>WENV170312704
CESM01393246
299855
Gammaproteobacteria
TAC
Val
>WENV170310652
CESM01058613
204522
Gammaproteobacteria
GAT
Ile
>WENV170311247
CESM01121167
481678
Gammaproteobacteria
GCA
Cys
>WENV170311574
CESM01157574
306288
Gammaproteobacteria
GCC
Gly
>WENV170313120
CESM01522793
180680
Gammaproteobacteria
GAC
Val
>WENV170312062
CESM01216604
301005
Gammaproteobacteria
TGC
Ala
>WENV170312718
CESM01401807
180678
Gammaproteobacteria
CCG
Arg
>WENV170310891
CESM01082545
201377
Gammaproteobacteria
TGG
Pro
>WENV170311279
CESM01125603
282018
Gammaproteobacteria
TGT
Thr
>WENV170310102
CESM01012391
300318
Gammaproteobacteria
GGC
Ala
>WENV170310409
CESM01037512
300318
Gammaproteobacteria
GGC
Ala
>WENV170311363
CESM01133581
180679
Gammaproteobacteria
CCA
Trp
>WENV170310411
CESM01037661
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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