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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170321171
CESR01035882
282894
Gammaproteobacteria
GAA
Phe
>WENV170321526
CESR01062031
123265
Gammaproteobacteria
GAG
Leu
>WENV170320804
CESR01011287
297858
Gammaproteobacteria
TGC
Ala
>WENV170320653
CESR01003560
178164
Gammaproteobacteria
GAT
Ile
>WENV170323021
CESR01226631
180053
Gammaproteobacteria
CAT
Met
>WENV170322464
CESR01146030
20618
Gammaproteobacteria
GGA
Ser
>WENV170320606
CESR01000447
311084
Gammaproteobacteria
GCC
Gly
>WENV170321219
CESR01039240
74240
Gammaproteobacteria
CAA
Leu
>WENV170322862
CESR01168826
329164
Gammaproteobacteria
TTT
Lys
>WENV170322218
CESR01122259
74339
Gammaproteobacteria
GAG
Leu
>WENV170321713
CESR01074137
351236
Gammaproteobacteria
TTT
Lys
>WENV170321267
CESR01041951
480516
Gammaproteobacteria
GCA
Cys
>WENV170323382
CESR01334419
184459
Gammaproteobacteria
CAT
Met
>WENV170323267
CESR01319782
176242
Gammaproteobacteria
CCG
Arg
>WENV170323434
CESR01337358
56694
Gammaproteobacteria
GGA
Ser
>WENV170322151
CESR01115789
74048
Gammaproteobacteria
CAA
Leu
>WENV170320661
CESR01003869
306288
Gammaproteobacteria
GCC
Gly
>WENV170323338
CESR01331449
182374
Gammaproteobacteria
CAT
Met
>WENV170322929
CESR01171858
370389
Gammaproteobacteria
GGC
Ala
>WENV170322007
CESR01099882
281418
Gammaproteobacteria
TGC
Ala
>WENV170320991
CESR01022707
180680
Gammaproteobacteria
GAC
Val
>WENV170321277
CESR01042220
176301
Gammaproteobacteria
GAT
Ile
>WENV170320854
CESR01014858
176301
Gammaproteobacteria
GAT
Ile
>WENV170323045
CESR01238801
180678
Gammaproteobacteria
CCG
Arg
>WENV170322709
CESR01164058
340790
Gammaproteobacteria
TGT
Thr
>WENV170321336
CESR01045486
186591
Gammaproteobacteria
ACG
Arg
>WENV170321335
CESR01045486
186591
Gammaproteobacteria
ACG
Arg
>WENV170322309
CESR01130785
282902
Gammaproteobacteria
TGT
Thr
>WENV170321450
CESR01057249
180679
Gammaproteobacteria
CCA
Trp
>WENV170321392
CESR01049966
180679
Gammaproteobacteria
CCA
Trp
>WENV170321374
CESR01048646
180679
Gammaproteobacteria
CCA
Trp
>WENV170320790
CESR01010802
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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