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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170333221
CESY01017840
282894
Gammaproteobacteria
GAA
Phe
>WENV170334270
CESY01153128
331330
Gammaproteobacteria
TAC
Val
>WENV170333096
CESY01006090
123265
Gammaproteobacteria
GAG
Leu
>WENV170333125
CESY01008532
297858
Gammaproteobacteria
TGC
Ala
>WENV170333405
CESY01041483
20664
Gammaproteobacteria
GCT
Ser
>WENV170333034
CESY01001262
178164
Gammaproteobacteria
GAT
Ile
>WENV170333961
CESY01112377
480653
Gammaproteobacteria
GCA
Cys
>WENV170333543
CESY01059545
329164
Gammaproteobacteria
TTT
Lys
>WENV170333091
CESY01005864
13452
Gammaproteobacteria
GCT
Ser
>WENV170333607
CESY01067995
197498
Gammaproteobacteria
TGG
Pro
>WENV170333627
CESY01069786
401684
Gammaproteobacteria
CCT
Arg
>WENV170333093
CESY01005864
232119
Gammaproteobacteria
ACG
Arg
>WENV170333092
CESY01005864
232119
Gammaproteobacteria
ACG
Arg
>WENV170333950
CESY01109862
306288
Gammaproteobacteria
GCC
Gly
>WENV170333213
CESY01016896
306288
Gammaproteobacteria
GCC
Gly
>WENV170333088
CESY01005649
306288
Gammaproteobacteria
GCC
Gly
>WENV170334476
CESY01214155
346373
Gammaproteobacteria
GAA
Phe
>WENV170334354
CESY01164414
180680
Gammaproteobacteria
GAC
Val
>WENV170333841
CESY01094881
342077
Gammaproteobacteria
TAC
Val
>WENV170334384
CESY01172441
178533
Gammaproteobacteria
GGG
Pro
>WENV170333884
CESY01100619
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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