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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170334913
CESZ01017677
480941
Gammaproteobacteria
TCC
Gly
>WENV170335517
CESZ01070863
20664
Gammaproteobacteria
GCT
Ser
>WENV170334889
CESZ01015212
178164
Gammaproteobacteria
GAT
Ile
>WENV170335541
CESZ01072488
299414
Gammaproteobacteria
TTT
Lys
>WENV170335396
CESZ01059628
176796
Gammaproteobacteria
GGG
Pro
>WENV170334986
CESZ01023346
180053
Gammaproteobacteria
CAT
Met
>WENV170335874
CESZ01105815
20618
Gammaproteobacteria
GGA
Ser
>WENV170335258
CESZ01044406
284022
Gammaproteobacteria
TGT
Thr
>WENV170335320
CESZ01050862
284022
Gammaproteobacteria
TGT
Thr
>WENV170335985
CESZ01120494
401696
Gammaproteobacteria
TTG
Gln
>WENV170335779
CESZ01098210
290068
Gammaproteobacteria
TTT
Lys
>WENV170335322
CESZ01050862
401199
Gammaproteobacteria
TCC
Gly
>WENV170334786
CESZ01008238
13452
Gammaproteobacteria
GCT
Ser
>WENV170335645
CESZ01083531
74339
Gammaproteobacteria
GAG
Leu
>WENV170335297
CESZ01048682
292006
Gammaproteobacteria
TGC
Ala
>WENV170335373
CESZ01057394
480516
Gammaproteobacteria
GCA
Cys
>WENV170336041
CESZ01142204
118413
Gammaproteobacteria
TAG
Leu
>WENV170336203
CESZ01199320
179888
Gammaproteobacteria
ACG
Arg
>WENV170335400
CESZ01060155
481678
Gammaproteobacteria
GCA
Cys
>WENV170335025
CESZ01025707
176544
Gammaproteobacteria
CAT
Met
>WENV170335401
CESZ01060155
73504
Gammaproteobacteria
TAA
Leu
>WENV170335296
CESZ01048682
176301
Gammaproteobacteria
GAT
Ile
>WENV170335893
CESZ01107128
285547
Gammaproteobacteria
TTG
Gln
>WENV170335609
CESZ01079926
8609
Gammaproteobacteria
GCT
Ser
>WENV170335442
CESZ01063319
282018
Gammaproteobacteria
TGT
Thr
>WENV170334914
CESZ01017677
296808
Gammaproteobacteria
GGT
Thr
>WENV170336022
CESZ01134849
281283
Gammaproteobacteria
GTG
His
>WENV170335499
CESZ01068541
281939
Gammaproteobacteria
TTT
Lys
>WENV170334783
CESZ01008201
281939
Gammaproteobacteria
TTT
Lys
>WENV170335385
CESZ01058795
179710
Gammaproteobacteria
GAC
Val
>WENV170335392
CESZ01059333
282902
Gammaproteobacteria
TGT
Thr
>WENV170334810
CESZ01009669
282902
Gammaproteobacteria
TGT
Thr
>WENV170335323
CESZ01050862
285826
Gammaproteobacteria
GGT
Thr
>WENV170334974
CESZ01022215
180679
Gammaproteobacteria
CCA
Trp
>WENV170336088
CESZ01164660
283486
Gammaproteobacteria
TGT
Thr
>WENV170336034
CESZ01139208
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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