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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170341396
CETD01003161
490292
Gammaproteobacteria
TCC
Gly
>WENV170341472
CETD01010889
208229
Gammaproteobacteria
TGG
Pro
>WENV170341497
CETD01012369
221668
Gammaproteobacteria
ACG
Arg
>WENV170341583
CETD01020494
180679
Gammaproteobacteria
CCA
Trp
>WENV170341609
CETD01022425
291402
Gammaproteobacteria
GTG
His
>WENV170341627
CETD01024878
284022
Gammaproteobacteria
TGT
Thr
>WENV170341649
CETD01026451
180680
Gammaproteobacteria
GAC
Val
>WENV170341664
CETD01028480
180678
Gammaproteobacteria
CCG
Arg
>WENV170341837
CETD01043909
158246
Gammaproteobacteria
GTC
Asp
>WENV170341845
CETD01044778
74240
Gammaproteobacteria
CAA
Leu
>WENV170341888
CETD01049671
300318
Gammaproteobacteria
GGC
Ala
>WENV170342038
CETD01068067
180679
Gammaproteobacteria
CCA
Trp
>WENV170342097
CETD01076548
74048
Gammaproteobacteria
CAA
Leu
>WENV170342111
CETD01078368
180680
Gammaproteobacteria
GAC
Val
>WENV170342349
CETD01110366
284022
Gammaproteobacteria
TGT
Thr
>WENV170342701
CETD01169460
20618
Gammaproteobacteria
GGA
Ser
>WENV170343217
CETD01351218
401684
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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