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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170347247
CETG01116903
208947
Alphaproteobacteria
CAT
Met
>WENV170347813
CETG01164414
400387
Alphaproteobacteria
GGT
Thr
>WENV170347489
CETG01140172
140963
Alphaproteobacteria
>WENV170347601
CETG01149490
140963
Alphaproteobacteria
>WENV170347342
CETG01126810
20437
Alphaproteobacteria
GGA
Ser
>WENV170346940
CETG01082702
201940
Alphaproteobacteria
CAT
Met
>WENV170347048
CETG01095269
201940
Alphaproteobacteria
CAT
Met
>WENV170347194
CETG01111574
201940
Alphaproteobacteria
CAT
Met
>WENV170346740
CETG01064375
140893
Alphaproteobacteria
CAA
Leu
>WENV170348460
CETG01271067
400518
Alphaproteobacteria
GAA
Phe
>WENV170347212
CETG01113647
197241
Alphaproteobacteria
GGG
Pro
>WENV170348482
CETG01287740
290043
Alphaproteobacteria
TGC
Ala
>WENV170347440
CETG01135083
280788
Alphaproteobacteria
TTT
Lys
>WENV170348774
CETG01404545
232927
Alphaproteobacteria
CAT
Met
>WENV170347918
CETG01171709
439135
Alphaproteobacteria
CAC
Val
>WENV170348456
CETG01269395
178729
Alphaproteobacteria
TGG
Pro
>WENV170346206
CETG01021030
178734
Alphaproteobacteria
TGG
Pro
>WENV170345932
CETG01001897
121250
Alphaproteobacteria
TAG
Leu
>WENV170346205
CETG01021030
178733
Alphaproteobacteria
CAT
Met
>WENV170348496
CETG01296401
427571
Alphaproteobacteria
GCC
Gly
>WENV170347154
CETG01106106
427571
Alphaproteobacteria
GCC
Gly
>WENV170346836
CETG01074305
140892
Alphaproteobacteria
TAG
Leu
>WENV170346921
CETG01080867
192275
Alphaproteobacteria
GTG
His
>WENV170346901
CETG01079288
192275
Alphaproteobacteria
GTG
His
>WENV170347531
CETG01144879
400517
Alphaproteobacteria
GGT
Thr
>WENV170348159
CETG01186049
481098
Alphaproteobacteria
CTG
Gln
>WENV170348787
CETG01408870
190625
Alphaproteobacteria
ACG
Arg
>WENV170348709
CETG01383981
400515
Alphaproteobacteria
GAC
Val
>WENV170347060
CETG01096723
37833
Alphaproteobacteria
GGA
Ser
>WENV170348544
CETG01319095
179724
Alphaproteobacteria
ACG
Arg
>WENV170348133
CETG01184758
229944
Alphaproteobacteria
CGG
Pro
>WENV170346372
CETG01034593
229944
Alphaproteobacteria
CGG
Pro
>WENV170346504
CETG01045424
296763
Alphaproteobacteria
CCA
Trp
>WENV170346240
CETG01023269
481099
Alphaproteobacteria
TCC
Gly
>WENV170347625
CETG01151811
428327
Alphaproteobacteria
GCC
Gly
>WENV170348643
CETG01354185
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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