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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170346000
CETG01006129
315775
Gammaproteobacteria
TGT
Thr
>WENV170346018
CETG01007986
20618
Gammaproteobacteria
GGA
Ser
>WENV170346076
CETG01011229
186591
Gammaproteobacteria
ACG
Arg
>WENV170346109
CETG01013778
180679
Gammaproteobacteria
CCA
Trp
>WENV170346122
CETG01015027
186591
Gammaproteobacteria
ACG
Arg
>WENV170346123
CETG01015027
186591
Gammaproteobacteria
ACG
Arg
>WENV170346124
CETG01015027
186591
Gammaproteobacteria
ACG
Arg
>WENV170346143
CETG01015978
180679
Gammaproteobacteria
CCA
Trp
>WENV170346165
CETG01017749
180680
Gammaproteobacteria
GAC
Val
>WENV170346184
CETG01019372
117821
Gammaproteobacteria
GTA
Tyr
>WENV170346291
CETG01027593
292194
Gammaproteobacteria
GGT
Thr
>WENV170346294
CETG01027928
178541
Gammaproteobacteria
CGG
Pro
>WENV170346306
CETG01028766
180678
Gammaproteobacteria
CCG
Arg
>WENV170346318
CETG01030067
81474
Gammaproteobacteria
CAG
Leu
>WENV170346438
CETG01039187
280699
Gammaproteobacteria
GGT
Thr
>WENV170346435
CETG01039187
280696
Gammaproteobacteria
TGT
Thr
>WENV170346612
CETG01053078
177028
Gammaproteobacteria
CAT
Met
>WENV170346641
CETG01055977
210406
Gammaproteobacteria
ACG
Arg
>WENV170346701
CETG01060336
73123
Gammaproteobacteria
CAA
Leu
>WENV170346754
CETG01065916
281276
Gammaproteobacteria
GGT
Thr
>WENV170346753
CETG01065916
399250
Gammaproteobacteria
TCC
Gly
>WENV170346784
CETG01068327
318157
Gammaproteobacteria
GTT
Asn
>WENV170346808
CETG01071663
304066
Gammaproteobacteria
TTT
Lys
>WENV170346854
CETG01076112
488965
Gammaproteobacteria
GCA
Cys
>WENV170347035
CETG01093690
74048
Gammaproteobacteria
CAA
Leu
>WENV170347132
CETG01103289
343342
Gammaproteobacteria
>WENV170347133
CETG01103365
218635
Gammaproteobacteria
GAC
Val
>WENV170347251
CETG01116965
118218
Gammaproteobacteria
TAG
Leu
>WENV170347325
CETG01124797
56340
Gammaproteobacteria
GGA
Ser
>WENV170347386
CETG01129973
178533
Gammaproteobacteria
GGG
Pro
>WENV170347407
CETG01131766
197551
Gammaproteobacteria
TCT
Arg
>WENV170347409
CETG01131766
118414
Gammaproteobacteria
TAG
Leu
>WENV170347432
CETG01134376
197233
Gammaproteobacteria
CAT
Met
>WENV170347457
CETG01137266
184459
Gammaproteobacteria
CAT
Met
>WENV170347501
CETG01141556
73501
Gammaproteobacteria
GAG
Leu
>WENV170347537
CETG01145245
180680
Gammaproteobacteria
GAC
Val
>WENV170347550
CETG01145966
180680
Gammaproteobacteria
GAC
Val
>WENV170347660
CETG01154807
329164
Gammaproteobacteria
TTT
Lys
>WENV170347836
CETG01165787
140861
Gammaproteobacteria
GTA
Tyr
>WENV170347845
CETG01166624
73498
Gammaproteobacteria
CAA
Leu
>WENV170347889
CETG01169367
398943
Gammaproteobacteria
GAC
Val
>WENV170347921
CETG01171856
29392
Gammaproteobacteria
GCT
Ser
>WENV170347949
CETG01173929
178540
Gammaproteobacteria
TGG
Pro
>WENV170347990
CETG01176001
284706
Gammaproteobacteria
GTT
Asn
>WENV170348005
CETG01177522
346373
Gammaproteobacteria
GAA
Phe
>WENV170348026
CETG01178791
56694
Gammaproteobacteria
GGA
Ser
>WENV170348035
CETG01179137
176663
Gammaproteobacteria
GGG
Pro
>WENV170348052
CETG01180272
176665
Gammaproteobacteria
CGG
Pro
>WENV170348101
CETG01183142
178535
Gammaproteobacteria
CCT
Arg
>WENV170348226
CETG01189245
176063
Gammaproteobacteria
GGG
Pro
>WENV170348247
CETG01189775
73044
Gammaproteobacteria
CAG
Leu
>WENV170348285
CETG01190953
56094
Gammaproteobacteria
TGA
Ser
>WENV170348321
CETG01191598
176065
Gammaproteobacteria
CCT
Arg
>WENV170348564
CETG01326298
178532
Gammaproteobacteria
CCG
Arg
>WENV170348629
CETG01350393
20273
Gammaproteobacteria
TGA
Ser
>WENV170348712
CETG01386315
292174
Gammaproteobacteria
GAA
Phe
>WENV170348741
CETG01394773
480653
Gammaproteobacteria
GCA
Cys
>WENV170348788
CETG01409037
281283
Gammaproteobacteria
GTG
His
>WENV170348819
CETG01415970
176478
Gammaproteobacteria
CAT
Met
>WENV170348863
CETG01426566
176061
Gammaproteobacteria
TCG
Arg
>WENV170348895
CETG01429561
282413
Gammaproteobacteria
GTT
Asn
>WENV170348897
CETG01429772
176064
Gammaproteobacteria
CAT
Met
>WENV170348899
CETG01430029
400354
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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