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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170357842
CETK01029537
158246
Gammaproteobacteria
GTC
Asp
>WENV170357590
CETK01011843
480941
Gammaproteobacteria
TCC
Gly
>WENV170359094
CETK01175324
178025
Gammaproteobacteria
GAC
Val
>WENV170358247
CETK01071987
292006
Gammaproteobacteria
TGC
Ala
>WENV170359200
CETK01260359
178168
Gammaproteobacteria
ACG
Arg
>WENV170359261
CETK01299005
488965
Gammaproteobacteria
GCA
Cys
>WENV170358374
CETK01085486
176544
Gammaproteobacteria
CAT
Met
>WENV170358246
CETK01071987
176301
Gammaproteobacteria
GAT
Ile
>WENV170358376
CETK01085486
180681
Gammaproteobacteria
TGG
Pro
>WENV170358375
CETK01085486
118640
Gammaproteobacteria
TAG
Leu
>WENV170359230
CETK01281334
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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