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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170359593
CETL01008089
360947
Alphaproteobacteria
TTT
Lys
>WENV170360051
CETL01060269
212319
Alphaproteobacteria
GTG
His
>WENV170360159
CETL01073247
192275
Alphaproteobacteria
GTG
His
>WENV170360506
CETL01113030
282981
Alphaproteobacteria
CCA
Trp
>WENV170360586
CETL01123482
481098
Alphaproteobacteria
CTG
Gln
>WENV170360644
CETL01130164
13340
Alphaproteobacteria
GCT
Ser
>WENV170360650
CETL01131222
178736
Alphaproteobacteria
CCT
Arg
>WENV170360678
CETL01134205
178733
Alphaproteobacteria
CAT
Met
>WENV170360679
CETL01134205
178734
Alphaproteobacteria
TGG
Pro
>WENV170360956
CETL01189019
400516
Alphaproteobacteria
TTG
Gln
>WENV170361128
CETL01287731
400530
Alphaproteobacteria
GAC
Val
>WENV170361173
CETL01307598
145377
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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