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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170374497
CETT01093703
74240
Gammaproteobacteria
CAA
Leu
>WENV170374490
CETT01092846
183804
Gammaproteobacteria
CAT
Met
>WENV170375088
CETT01164198
197233
Gammaproteobacteria
CAT
Met
>WENV170375476
CETT01299819
182374
Gammaproteobacteria
CAT
Met
>WENV170373825
CETT01024165
180679
Gammaproteobacteria
CCA
Trp
>WENV170374082
CETT01047692
220813
Gammaproteobacteria
CCG
Arg
>WENV170373553
CETT01003274
178164
Gammaproteobacteria
GAT
Ile
>WENV170374350
CETT01077708
311084
Gammaproteobacteria
GCC
Gly
>WENV170374914
CETT01141911
306288
Gammaproteobacteria
GCC
Gly
>WENV170375503
CETT01303274
56694
Gammaproteobacteria
GGA
Ser
>WENV170375236
CETT01229393
291796
Gammaproteobacteria
GGC
Ala
>WENV170374684
CETT01117370
370389
Gammaproteobacteria
GGC
Ala
>WENV170374505
CETT01094777
284706
Gammaproteobacteria
GTT
Asn
>WENV170374516
CETT01095749
342077
Gammaproteobacteria
TAC
Val
>WENV170374712
CETT01120061
292006
Gammaproteobacteria
TGC
Ala
>WENV170374735
CETT01122629
243308
Gammaproteobacteria
TGG
Pro
>WENV170374823
CETT01133081
334421
Gammaproteobacteria
TGT
Thr
>WENV170374612
CETT01107734
315775
Gammaproteobacteria
TGT
Thr
>WENV170374540
CETT01098257
329164
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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