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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170376982
CETU01118826
158246
Gammaproteobacteria
GTC
Asp
>WENV170377556
CETU01165976
123265
Gammaproteobacteria
GAG
Leu
>WENV170377358
CETU01154338
283966
Gammaproteobacteria
CCT
Arg
>WENV170376511
CETU01073892
292006
Gammaproteobacteria
TGC
Ala
>WENV170376790
CETU01097190
480516
Gammaproteobacteria
GCA
Cys
>WENV170377084
CETU01128685
490292
Gammaproteobacteria
TCC
Gly
>WENV170376510
CETU01073892
176301
Gammaproteobacteria
GAT
Ile
>WENV170377083
CETU01128685
141076
Gammaproteobacteria
GTA
Tyr
>WENV170377771
CETU01219108
186591
Gammaproteobacteria
ACG
Arg
>WENV170377716
CETU01181741
180679
Gammaproteobacteria
CCA
Trp
>WENV170377923
CETU01294059
179189
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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