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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170401989
CEUE01290610
285360
Bacteroidota
TTT
Lys
>WENV170399507
CEUE01021653
400818
Bacteroidota
TTC
Glu
>WENV170399631
CEUE01030781
400818
Bacteroidota
TTC
Glu
>WENV170399718
CEUE01039156
400818
Bacteroidota
TTC
Glu
>WENV170400004
CEUE01065657
400818
Bacteroidota
TTC
Glu
>WENV170400072
CEUE01070387
400818
Bacteroidota
TTC
Glu
>WENV170400223
CEUE01086395
400818
Bacteroidota
TTC
Glu
>WENV170400387
CEUE01103406
400818
Bacteroidota
TTC
Glu
>WENV170400710
CEUE01139933
400818
Bacteroidota
TTC
Glu
>WENV170400924
CEUE01164837
400818
Bacteroidota
TTC
Glu
>WENV170401785
CEUE01273558
400818
Bacteroidota
TTC
Glu
>WENV170400868
CEUE01157306
288475
Bacteroidota
GCC
Gly
>WENV170400457
CEUE01111770
156595
Bacteroidota
TGG
Pro
>WENV170400082
CEUE01071984
198599
Bacteroidota
GTG
His
>WENV170400749
CEUE01144948
198599
Bacteroidota
GTG
His
>WENV170400395
CEUE01104463
209752
Bacteroidota
GGC
Ala
>WENV170401706
CEUE01265787
156605
Bacteroidota
GAC
Val
>WENV170401154
CEUE01193653
156605
Bacteroidota
GAC
Val
>WENV170400919
CEUE01164371
156605
Bacteroidota
GAC
Val
>WENV170400915
CEUE01163100
156605
Bacteroidota
GAC
Val
>WENV170400831
CEUE01154859
156605
Bacteroidota
GAC
Val
>WENV170400264
CEUE01089956
156605
Bacteroidota
GAC
Val
>WENV170399888
CEUE01053958
156605
Bacteroidota
GAC
Val
>WENV170399639
CEUE01031257
156605
Bacteroidota
GAC
Val
>WENV170399365
CEUE01009608
23370
Bacteroidota
GGA
Ser
>WENV170399856
CEUE01051200
372872
Bacteroidota
TCC
Gly
>WENV170400445
CEUE01109548
364431
Bacteroidota
TCC
Gly
>WENV170400360
CEUE01100129
364431
Bacteroidota
TCC
Gly
>WENV170399759
CEUE01043108
364431
Bacteroidota
TCC
Gly
>WENV170399739
CEUE01041443
364431
Bacteroidota
TCC
Gly
>WENV170399617
CEUE01029938
364431
Bacteroidota
TCC
Gly
>WENV170399575
CEUE01027291
364431
Bacteroidota
TCC
Gly
>WENV170399434
CEUE01015778
364431
Bacteroidota
TCC
Gly
>WENV170400747
CEUE01144895
281190
Bacteroidota
CAT
Met
>WENV170401402
CEUE01228962
240785
Bacteroidota
GTC
Asp
>WENV170400435
CEUE01108511
240785
Bacteroidota
GTC
Asp
>WENV170400230
CEUE01086999
240785
Bacteroidota
GTC
Asp
>WENV170399364
CEUE01009449
240785
Bacteroidota
GTC
Asp
>WENV170401648
CEUE01260492
155786
Bacteroidota
TGG
Pro
>WENV170399532
CEUE01023604
402171
Bacteroidota
TTC
Glu
>WENV170400608
CEUE01126799
155808
Bacteroidota
TGG
Pro
>WENV170399962
CEUE01060891
155808
Bacteroidota
TGG
Pro
>WENV170399457
CEUE01017553
155808
Bacteroidota
TGG
Pro
>WENV170399614
CEUE01029355
176812
Bacteroidota
TCT
Arg
>WENV170400550
CEUE01120562
176812
Bacteroidota
TCT
Arg
>WENV170399865
CEUE01051679
291910
Bacteroidota
TTG
Gln
>WENV170400405
CEUE01104734
366169
Bacteroidota
GAA
Phe
>WENV170399680
CEUE01035805
21789
Bacteroidota
GGA
Ser
>WENV170401698
CEUE01264539
227539
Bacteroidota
GTT
Asn
>WENV170401388
CEUE01226993
227539
Bacteroidota
GTT
Asn
>WENV170400446
CEUE01110309
227539
Bacteroidota
GTT
Asn
>WENV170402271
CEUE01350622
344563
Bacteroidota
TTG
Gln
>WENV170399215
CEUE01000615
235895
Bacteroidota
GTT
Asn
>WENV170401596
CEUE01253712
156596
Bacteroidota
TAC
Val
>WENV170400199
CEUE01083539
156596
Bacteroidota
TAC
Val
>WENV170401991
CEUE01290719
299065
Bacteroidota
TTG
Gln
>WENV170399276
CEUE01005261
299065
Bacteroidota
TTG
Gln
>WENV170401871
CEUE01283087
193718
Bacteroidota
GTC
Asp
>WENV170400847
CEUE01155611
193718
Bacteroidota
GTC
Asp
>WENV170400616
CEUE01129095
193718
Bacteroidota
GTC
Asp
>WENV170399556
CEUE01024958
231584
Bacteroidota
TCT
Arg
>WENV170401924
CEUE01286755
181598
Bacteroidota
GTT
Asn
>WENV170400419
CEUE01106640
340026
Bacteroidota
CAT
Met
>WENV170401206
CEUE01200046
206043
Bacteroidota
GTC
Asp
>WENV170401144
CEUE01192131
206043
Bacteroidota
GTC
Asp
>WENV170401615
CEUE01256650
372845
Bacteroidota
CCA
Trp
>WENV170401421
CEUE01232439
372845
Bacteroidota
CCA
Trp
>WENV170401364
CEUE01223565
372845
Bacteroidota
CCA
Trp
>WENV170400718
CEUE01141477
372845
Bacteroidota
CCA
Trp
>WENV170400543
CEUE01120302
372845
Bacteroidota
CCA
Trp
>WENV170399940
CEUE01059074
372845
Bacteroidota
CCA
Trp
>WENV170399779
CEUE01045275
372845
Bacteroidota
CCA
Trp
>WENV170399676
CEUE01035457
372845
Bacteroidota
CCA
Trp
>WENV170399312
CEUE01008179
372845
Bacteroidota
CCA
Trp
>WENV170399252
CEUE01002657
372845
Bacteroidota
CCA
Trp
>WENV170401398
CEUE01228859
182234
Bacteroidota
TGT
Thr
>WENV170400864
CEUE01157158
233847
Bacteroidota
TGC
Ala
>WENV170399914
CEUE01056527
183480
Bacteroidota
TGC
Ala
>WENV170399823
CEUE01048920
24958
Bacteroidota
GGA
Ser
>WENV170401834
CEUE01280204
361792
Bacteroidota
GAA
Phe
>WENV170400297
CEUE01092904
361792
Bacteroidota
GAA
Phe
>WENV170399627
CEUE01030412
361792
Bacteroidota
GAA
Phe
>WENV170401995
CEUE01291050
179598
Bacteroidota
CAT
Met
>WENV170402003
CEUE01291478
156340
Bacteroidota
GGG
Pro
>WENV170401557
CEUE01247567
156340
Bacteroidota
GGG
Pro
>WENV170401078
CEUE01182898
156340
Bacteroidota
GGG
Pro
>WENV170399731
CEUE01040184
56162
Bacteroidota
TGA
Ser
>WENV170401152
CEUE01193232
56162
Bacteroidota
TGA
Ser
>WENV170402181
CEUE01300159
179695
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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