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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170438975
CEUV01005862
398943
Gammaproteobacteria
GAC
Val
>WENV170439355
CEUV01027509
488965
Gammaproteobacteria
GCA
Cys
>WENV170440111
CEUV01070548
230011
Gammaproteobacteria
ACG
Arg
>WENV170440119
CEUV01071239
297858
Gammaproteobacteria
TGC
Ala
>WENV170440246
CEUV01082692
346373
Gammaproteobacteria
GAA
Phe
>WENV170440264
CEUV01084083
317792
Gammaproteobacteria
TGC
Ala
>WENV170440357
CEUV01092045
351236
Gammaproteobacteria
TTT
Lys
>WENV170440441
CEUV01097799
158246
Gammaproteobacteria
GTC
Asp
>WENV170440688
CEUV01121739
197498
Gammaproteobacteria
TGG
Pro
>WENV170440690
CEUV01121739
291402
Gammaproteobacteria
GTG
His
>WENV170441206
CEUV01151613
334421
Gammaproteobacteria
TGT
Thr
>WENV170441287
CEUV01154518
282902
Gammaproteobacteria
TGT
Thr
>WENV170441397
CEUV01156595
179284
Gammaproteobacteria
CAT
Met
>WENV170441816
CEUV01290301
402723
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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