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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170445165
CEUY01023289
242732
Gammaproteobacteria
ACG
Arg
>WENV170444971
CEUY01013821
186591
Gammaproteobacteria
ACG
Arg
>WENV170444970
CEUY01013821
186591
Gammaproteobacteria
ACG
Arg
>WENV170444874
CEUY01008626
186591
Gammaproteobacteria
ACG
Arg
>WENV170444972
CEUY01013821
186591
Gammaproteobacteria
ACG
Arg
>WENV170446462
CEUY01133963
73123
Gammaproteobacteria
CAA
Leu
>WENV170445589
CEUY01048751
74240
Gammaproteobacteria
CAA
Leu
>WENV170445352
CEUY01035343
74048
Gammaproteobacteria
CAA
Leu
>WENV170445602
CEUY01050417
118371
Gammaproteobacteria
CAA
Leu
>WENV170446373
CEUY01122116
73044
Gammaproteobacteria
CAG
Leu
>WENV170447967
CEUY01461295
176064
Gammaproteobacteria
CAT
Met
>WENV170444956
CEUY01013069
176520
Gammaproteobacteria
CAT
Met
>WENV170446642
CEUY01151241
281172
Gammaproteobacteria
CAT
Met
>WENV170446803
CEUY01167657
184459
Gammaproteobacteria
CAT
Met
>WENV170448093
CEUY01483459
176545
Gammaproteobacteria
CAT
Met
>WENV170445422
CEUY01039542
280807
Gammaproteobacteria
CAT
Met
>WENV170444856
CEUY01007273
238652
Gammaproteobacteria
CAT
Met
>WENV170446833
CEUY01170859
176478
Gammaproteobacteria
CAT
Met
>WENV170445692
CEUY01058080
180679
Gammaproteobacteria
CCA
Trp
>WENV170445417
CEUY01039229
180679
Gammaproteobacteria
CCA
Trp
>WENV170445418
CEUY01039423
178436
Gammaproteobacteria
CCG
Arg
>WENV170447807
CEUY01400529
176175
Gammaproteobacteria
CCT
Arg
>WENV170447394
CEUY01205976
178221
Gammaproteobacteria
CCT
Arg
>WENV170446410
CEUY01126090
176665
Gammaproteobacteria
CGG
Pro
>WENV170445937
CEUY01080642
346373
Gammaproteobacteria
GAA
Phe
>WENV170447804
CEUY01399950
208313
Gammaproteobacteria
GAC
Val
>WENV170447223
CEUY01199733
218635
Gammaproteobacteria
GAC
Val
>WENV170447395
CEUY01205979
180680
Gammaproteobacteria
GAC
Val
>WENV170444855
CEUY01007273
143504
Gammaproteobacteria
GAG
Leu
>WENV170444752
CEUY01000645
178164
Gammaproteobacteria
GAT
Ile
>WENV170444823
CEUY01005253
209813
Gammaproteobacteria
GAT
Ile
>WENV170445714
CEUY01059968
176301
Gammaproteobacteria
GAT
Ile
>WENV170444849
CEUY01006835
480516
Gammaproteobacteria
GCA
Cys
>WENV170445409
CEUY01038355
480397
Gammaproteobacteria
GCA
Cys
>WENV170445185
CEUY01025214
480397
Gammaproteobacteria
GCA
Cys
>WENV170444848
CEUY01006835
306288
Gammaproteobacteria
GCC
Gly
>WENV170445540
CEUY01046380
306288
Gammaproteobacteria
GCC
Gly
>WENV170446186
CEUY01103825
20552
Gammaproteobacteria
GCT
Ser
>WENV170445066
CEUY01019741
20664
Gammaproteobacteria
GCT
Ser
>WENV170445906
CEUY01077729
20618
Gammaproteobacteria
GGA
Ser
>WENV170446737
CEUY01161373
56694
Gammaproteobacteria
GGA
Ser
>WENV170445059
CEUY01019097
176663
Gammaproteobacteria
GGG
Pro
>WENV170445537
CEUY01046257
292194
Gammaproteobacteria
GGT
Thr
>WENV170445597
CEUY01049595
280699
Gammaproteobacteria
GGT
Thr
>WENV170445893
CEUY01077154
281283
Gammaproteobacteria
GTG
His
>WENV170446594
CEUY01145933
286691
Gammaproteobacteria
GTG
His
>WENV170447312
CEUY01204073
284706
Gammaproteobacteria
GTT
Asn
>WENV170447245
CEUY01201049
280811
Gammaproteobacteria
GTT
Asn
>WENV170445318
CEUY01033407
134404
Gammaproteobacteria
TAG
Leu
>WENV170445336
CEUY01034212
118413
Gammaproteobacteria
TAG
Leu
>WENV170448024
CEUY01473289
176061
Gammaproteobacteria
TCG
Arg
>WENV170447331
CEUY01204642
176168
Gammaproteobacteria
TCT
Arg
>WENV170445288
CEUY01031929
20400
Gammaproteobacteria
TGA
Ser
>WENV170446929
CEUY01180512
20968
Gammaproteobacteria
TGA
Ser
>WENV170445255
CEUY01029655
243308
Gammaproteobacteria
TGG
Pro
>WENV170447168
CEUY01197021
197498
Gammaproteobacteria
TGG
Pro
>WENV170445562
CEUY01047263
180681
Gammaproteobacteria
TGG
Pro
>WENV170445118
CEUY01021346
281275
Gammaproteobacteria
TGT
Thr
>WENV170445594
CEUY01049595
280696
Gammaproteobacteria
TGT
Thr
>WENV170447134
CEUY01194321
315775
Gammaproteobacteria
TGT
Thr
>WENV170445822
CEUY01070962
281282
Gammaproteobacteria
TTC
Glu
>WENV170447771
CEUY01389312
400354
Gammaproteobacteria
TTG
Gln
>WENV170445808
CEUY01068537
299414
Gammaproteobacteria
TTT
Lys
>WENV170445807
CEUY01068537
299414
Gammaproteobacteria
TTT
Lys
>WENV170446211
CEUY01105785
304066
Gammaproteobacteria
TTT
Lys
>WENV170446210
CEUY01105785
304066
Gammaproteobacteria
TTT
Lys
>WENV170445627
CEUY01053246
329164
Gammaproteobacteria
TTT
Lys
>WENV170445206
CEUY01026911
329164
Gammaproteobacteria
TTT
Lys
>WENV170445205
CEUY01026911
329164
Gammaproteobacteria
TTT
Lys
>WENV170448023
CEUY01473289
301064
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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