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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170487226
CEVO01037034
331330
Gammaproteobacteria
TAC
Val
>WENV170488447
CEVO01211579
281440
Gammaproteobacteria
TGT
Thr
>WENV170487032
CEVO01018077
178539
Gammaproteobacteria
GAC
Val
>WENV170486866
CEVO01004342
117915
Gammaproteobacteria
TAG
Leu
>WENV170487544
CEVO01068177
73781
Gammaproteobacteria
TAA
Leu
>WENV170488475
CEVO01217111
281437
Gammaproteobacteria
CCA
Trp
>WENV170487787
CEVO01092547
399352
Gammaproteobacteria
GCC
Gly
>WENV170487547
CEVO01068239
285363
Gammaproteobacteria
TGT
Thr
>WENV170488384
CEVO01193891
220813
Gammaproteobacteria
CCG
Arg
>WENV170488035
CEVO01116303
281441
Gammaproteobacteria
CCT
Arg
>WENV170487963
CEVO01110216
176868
Gammaproteobacteria
CAT
Met
>WENV170488263
CEVO01148765
176795
Gammaproteobacteria
CAT
Met
>WENV170486952
CEVO01011879
329164
Gammaproteobacteria
TTT
Lys
>WENV170487750
CEVO01088097
74339
Gammaproteobacteria
GAG
Leu
>WENV170487115
CEVO01026384
351236
Gammaproteobacteria
TTT
Lys
>WENV170487305
CEVO01043896
292006
Gammaproteobacteria
TGC
Ala
>WENV170487189
CEVO01033100
281432
Gammaproteobacteria
TTG
Gln
>WENV170487096
CEVO01025082
73827
Gammaproteobacteria
CAG
Leu
>WENV170488448
CEVO01211579
140806
Gammaproteobacteria
GTA
Tyr
>WENV170487810
CEVO01095487
197498
Gammaproteobacteria
TGG
Pro
>WENV170487664
CEVO01079426
92638
Gammaproteobacteria
TAA
Leu
>WENV170487663
CEVO01079426
481678
Gammaproteobacteria
GCA
Cys
>WENV170486850
CEVO01003336
176794
Gammaproteobacteria
GAT
Ile
>WENV170487384
CEVO01051247
306288
Gammaproteobacteria
GCC
Gly
>WENV170486972
CEVO01013802
242775
Gammaproteobacteria
TGG
Pro
>WENV170487590
CEVO01072523
177028
Gammaproteobacteria
CAT
Met
>WENV170488406
CEVO01200363
63431
Gammaproteobacteria
GGA
Ser
>WENV170487075
CEVO01023268
178550
Gammaproteobacteria
ACG
Arg
>WENV170487274
CEVO01041420
211156
Gammaproteobacteria
CGG
Pro
>WENV170487007
CEVO01016285
120822
Gammaproteobacteria
GAG
Leu
>WENV170487097
CEVO01025082
81474
Gammaproteobacteria
CAG
Leu
>WENV170487098
CEVO01025082
81474
Gammaproteobacteria
CAG
Leu
>WENV170488449
CEVO01211579
480549
Gammaproteobacteria
TCC
Gly
>WENV170488172
CEVO01124481
184457
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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