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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170495946
CEVS01011053
291402
Gammaproteobacteria
GTG
His
>WENV170495947
CEVS01011056
282902
Gammaproteobacteria
TGT
Thr
>WENV170495980
CEVS01014016
480941
Gammaproteobacteria
TCC
Gly
>WENV170496077
CEVS01021649
176794
Gammaproteobacteria
GAT
Ile
>WENV170496078
CEVS01021649
281436
Gammaproteobacteria
TGC
Ala
>WENV170496640
CEVS01082171
281668
Gammaproteobacteria
TTT
Lys
>WENV170497014
CEVS01125136
297858
Gammaproteobacteria
TGC
Ala
>WENV170497101
CEVS01137235
480629
Gammaproteobacteria
GCA
Cys
>WENV170497192
CEVS01153104
281939
Gammaproteobacteria
TTT
Lys
>WENV170497506
CEVS01189374
186591
Gammaproteobacteria
ACG
Arg
>WENV170497663
CEVS01215403
74110
Gammaproteobacteria
CAA
Leu
>WENV170497734
CEVS01263498
281437
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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