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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170517154
CEWE01014101
140963
Alphaproteobacteria
>WENV170517058
CEWE01006421
178510
Alphaproteobacteria
ACG
Arg
>WENV170517617
CEWE01048422
201940
Alphaproteobacteria
CAT
Met
>WENV170519037
CEWE01195817
281650
Alphaproteobacteria
CCA
Trp
>WENV170516996
CEWE01002401
281650
Alphaproteobacteria
CCA
Trp
>WENV170517256
CEWE01021542
296763
Alphaproteobacteria
CCA
Trp
>WENV170517598
CEWE01047430
233665
Alphaproteobacteria
CCT
Arg
>WENV170517473
CEWE01038075
75222
Alphaproteobacteria
GAG
Leu
>WENV170518995
CEWE01190777
88908
Alphaproteobacteria
GAG
Leu
>WENV170519744
CEWE01255732
199130
Alphaproteobacteria
GAT
Ile
>WENV170518646
CEWE01147694
424450
Alphaproteobacteria
GGT
Thr
>WENV170519400
CEWE01233564
299509
Alphaproteobacteria
GTT
Asn
>WENV170519459
CEWE01238389
398994
Alphaproteobacteria
GTT
Asn
>WENV170519851
CEWE01260853
287529
Alphaproteobacteria
TAC
Val
>WENV170517137
CEWE01012525
488318
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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