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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550727
CXWF01017756
73123
Gammaproteobacteria
CAA
Leu
>WENV170550629
CXWF01005923
226555
Gammaproteobacteria
GTC
Asp
>WENV170550987
CXWF01062545
209464
Gammaproteobacteria
CCG
Arg
>WENV170550741
CXWF01020614
178539
Gammaproteobacteria
GAC
Val
>WENV170550555
CXWF01001033
281275
Gammaproteobacteria
TGT
Thr
>WENV170551014
CXWF01067579
118218
Gammaproteobacteria
TAG
Leu
>WENV170550810
CXWF01031273
180053
Gammaproteobacteria
CAT
Met
>WENV170550664
CXWF01010887
176662
Gammaproteobacteria
ACG
Arg
>WENV170550860
CXWF01040121
284397
Gammaproteobacteria
GAA
Phe
>WENV170550626
CXWF01005923
178538
Gammaproteobacteria
GTC
Asp
>WENV170550627
CXWF01005923
178538
Gammaproteobacteria
GTC
Asp
>WENV170550798
CXWF01028627
197551
Gammaproteobacteria
TCT
Arg
>WENV170550924
CXWF01050587
281282
Gammaproteobacteria
TTC
Glu
>WENV170550978
CXWF01060064
282550
Gammaproteobacteria
TAC
Val
>WENV170550891
CXWF01045213
329164
Gammaproteobacteria
TTT
Lys
>WENV170550918
CXWF01049293
178535
Gammaproteobacteria
CCT
Arg
>WENV170550796
CXWF01028292
20410
Gammaproteobacteria
TGA
Ser
>WENV170550580
CXWF01002070
73498
Gammaproteobacteria
CAA
Leu
>WENV170550624
CXWF01005432
480516
Gammaproteobacteria
GCA
Cys
>WENV170550644
CXWF01006628
57340
Gammaproteobacteria
GGA
Ser
>WENV170550790
CXWF01027177
178541
Gammaproteobacteria
CGG
Pro
>WENV170550816
CXWF01032827
56340
Gammaproteobacteria
GGA
Ser
>WENV170551015
CXWF01067631
346373
Gammaproteobacteria
GAA
Phe
>WENV170550997
CXWF01063212
178532
Gammaproteobacteria
CCG
Arg
>WENV170551070
CXWF01094879
370389
Gammaproteobacteria
GGC
Ala
>WENV170550749
CXWF01021481
89769
Gammaproteobacteria
CAG
Leu
>WENV170550584
CXWF01002440
371341
Gammaproteobacteria
GTT
Asn
>WENV170550908
CXWF01048278
371341
Gammaproteobacteria
GTT
Asn
>WENV170550928
CXWF01051528
176063
Gammaproteobacteria
GGG
Pro
>WENV170550760
CXWF01022873
201377
Gammaproteobacteria
TGG
Pro
>WENV170550863
CXWF01040766
176478
Gammaproteobacteria
CAT
Met
>WENV170550959
CXWF01056412
178533
Gammaproteobacteria
GGG
Pro
>WENV170550856
CXWF01039041
20968
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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