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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170570287
FLMP01500404
297858
Gammaproteobacteria
TGC
Ala
>WENV170567374
FLMP01000154
480941
Gammaproteobacteria
TCC
Gly
>WENV170569951
FLMP01364184
283221
Gammaproteobacteria
GCC
Gly
>WENV170567429
FLMP01000454
176796
Gammaproteobacteria
GGG
Pro
>WENV170567495
FLMP01001103
176796
Gammaproteobacteria
GGG
Pro
>WENV170568602
FLMP01054510
176796
Gammaproteobacteria
GGG
Pro
>WENV170570106
FLMP01423290
176796
Gammaproteobacteria
GGG
Pro
>WENV170569463
FLMP01210339
178469
Gammaproteobacteria
CAT
Met
>WENV170568443
FLMP01040359
191061
Gammaproteobacteria
ACG
Arg
>WENV170569679
FLMP01267979
191061
Gammaproteobacteria
ACG
Arg
>WENV170567408
FLMP01000359
185999
Gammaproteobacteria
CCG
Arg
>WENV170569722
FLMP01280601
311084
Gammaproteobacteria
GCC
Gly
>WENV170567543
FLMP01001699
311084
Gammaproteobacteria
GCC
Gly
>WENV170569949
FLMP01364184
481023
Gammaproteobacteria
GCA
Cys
>WENV170569485
FLMP01215200
292006
Gammaproteobacteria
TGC
Ala
>WENV170569723
FLMP01280601
480629
Gammaproteobacteria
GCA
Cys
>WENV170567544
FLMP01001699
480629
Gammaproteobacteria
GCA
Cys
>WENV170568441
FLMP01040107
178168
Gammaproteobacteria
ACG
Arg
>WENV170570222
FLMP01472551
243308
Gammaproteobacteria
TGG
Pro
>WENV170570110
FLMP01425131
243308
Gammaproteobacteria
TGG
Pro
>WENV170569982
FLMP01374564
243308
Gammaproteobacteria
TGG
Pro
>WENV170569542
FLMP01227349
243308
Gammaproteobacteria
TGG
Pro
>WENV170569349
FLMP01176683
243308
Gammaproteobacteria
TGG
Pro
>WENV170568938
FLMP01100121
243308
Gammaproteobacteria
TGG
Pro
>WENV170568613
FLMP01055438
243308
Gammaproteobacteria
TGG
Pro
>WENV170567994
FLMP01012451
243308
Gammaproteobacteria
TGG
Pro
>WENV170567681
FLMP01003525
243308
Gammaproteobacteria
TGG
Pro
>WENV170567626
FLMP01002715
243308
Gammaproteobacteria
TGG
Pro
>WENV170569676
FLMP01267600
220751
Gammaproteobacteria
GAT
Ile
>WENV170568979
FLMP01104541
281436
Gammaproteobacteria
TGC
Ala
>WENV170568523
FLMP01046899
481325
Gammaproteobacteria
TCC
Gly
>WENV170570353
FLMP01536362
283226
Gammaproteobacteria
TAC
Val
>WENV170569950
FLMP01364184
73481
Gammaproteobacteria
TAA
Leu
>WENV170569952
FLMP01364184
73481
Gammaproteobacteria
TAA
Leu
>WENV170567877
FLMP01008506
181365
Gammaproteobacteria
CAT
Met
>WENV170568978
FLMP01104541
176794
Gammaproteobacteria
GAT
Ile
>WENV170569629
FLMP01253599
335783
Gammaproteobacteria
GTT
Asn
>WENV170567323
FLMP01000018
335783
Gammaproteobacteria
GTT
Asn
>WENV170567322
FLMP01000018
335783
Gammaproteobacteria
GTT
Asn
>WENV170569714
FLMP01278081
177028
Gammaproteobacteria
CAT
Met
>WENV170567872
FLMP01008370
177028
Gammaproteobacteria
CAT
Met
>WENV170570352
FLMP01536189
283225
Gammaproteobacteria
TGT
Thr
>WENV170569544
FLMP01227350
239021
Gammaproteobacteria
TCT
Arg
>WENV170569484
FLMP01215200
176301
Gammaproteobacteria
GAT
Ile
>WENV170569302
FLMP01164624
176301
Gammaproteobacteria
GAT
Ile
>WENV170568031
FLMP01013736
176301
Gammaproteobacteria
GAT
Ile
>WENV170567768
FLMP01005130
176301
Gammaproteobacteria
GAT
Ile
>WENV170567459
FLMP01000653
176301
Gammaproteobacteria
GAT
Ile
>WENV170567349
FLMP01000070
176301
Gammaproteobacteria
GAT
Ile
>WENV170570220
FLMP01471619
230011
Gammaproteobacteria
ACG
Arg
>WENV170570361
FLMP01540102
178475
Gammaproteobacteria
GAC
Val
>WENV170570205
FLMP01464406
283224
Gammaproteobacteria
GAA
Phe
>WENV170570351
FLMP01536189
283224
Gammaproteobacteria
GAA
Phe
>WENV170567602
FLMP01002340
340790
Gammaproteobacteria
TGT
Thr
>WENV170567577
FLMP01002028
340790
Gammaproteobacteria
TGT
Thr
>WENV170567368
FLMP01000151
201377
Gammaproteobacteria
TGG
Pro
>WENV170568717
FLMP01069642
281791
Gammaproteobacteria
GTG
His
>WENV170569068
FLMP01117234
181277
Gammaproteobacteria
ACG
Arg
>WENV170568289
FLMP01027794
181277
Gammaproteobacteria
ACG
Arg
>WENV170568261
FLMP01025717
181277
Gammaproteobacteria
ACG
Arg
>WENV170567520
FLMP01001505
181277
Gammaproteobacteria
ACG
Arg
>WENV170567450
FLMP01000595
282018
Gammaproteobacteria
TGT
Thr
>WENV170567636
FLMP01002792
286980
Gammaproteobacteria
TTT
Lys
>WENV170567440
FLMP01000560
286980
Gammaproteobacteria
TTT
Lys
>WENV170568487
FLMP01044321
283521
Gammaproteobacteria
GAA
Phe
>WENV170570181
FLMP01454066
283521
Gammaproteobacteria
GAA
Phe
>WENV170570090
FLMP01415907
281939
Gammaproteobacteria
TTT
Lys
>WENV170570347
FLMP01534389
282902
Gammaproteobacteria
TGT
Thr
>WENV170568263
FLMP01026148
282902
Gammaproteobacteria
TGT
Thr
>WENV170568168
FLMP01020580
282902
Gammaproteobacteria
TGT
Thr
>WENV170567461
FLMP01000653
282902
Gammaproteobacteria
TGT
Thr
>WENV170567372
FLMP01000154
282902
Gammaproteobacteria
TGT
Thr
>WENV170570146
FLMP01435567
118341
Gammaproteobacteria
CAA
Leu
>WENV170569791
FLMP01305247
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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