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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180025905
FTIR01000006
282943
Betaproteobacteria
CTT
Lys
>WENV180025907
FTIR01000018
185257
Betaproteobacteria
CAT
Met
>WENV180025928
FTIR01000287
284981
Betaproteobacteria
GTT
Asn
>WENV180025935
FTIR01000470
184549
Betaproteobacteria
CAT
Met
>WENV180025944
FTIR01000534
282943
Betaproteobacteria
CTT
Lys
>WENV180025967
FTIR01001013
290590
Betaproteobacteria
TAC
Val
>WENV180025974
FTIR01001172
100103
Betaproteobacteria
GTA
Tyr
>WENV180026001
FTIR01002178
283193
Betaproteobacteria
CCA
Trp
>WENV180026021
FTIR01002555
56360
Betaproteobacteria
CGA
Ser
>WENV180026032
FTIR01002917
56360
Betaproteobacteria
CGA
Ser
>WENV180026034
FTIR01003797
185257
Betaproteobacteria
CAT
Met
>WENV180026049
FTIR01008498
56360
Betaproteobacteria
CGA
Ser
>WENV180026058
FTIR01012964
282943
Betaproteobacteria
CTT
Lys
>WENV180026082
FTIR01030384
56360
Betaproteobacteria
CGA
Ser
>WENV180026111
FTIR01082437
283193
Betaproteobacteria
CCA
Trp
>WENV180026147
FTIR01168560
290590
Betaproteobacteria
TAC
Val
>WENV180026171
FTIR01236147
284981
Betaproteobacteria
GTT
Asn
>WENV180026182
FTIR01257454
290590
Betaproteobacteria
TAC
Val
>WENV180026186
FTIR01287815
100103
Betaproteobacteria
GTA
Tyr
>WENV180026211
FTIR01376837
284981
Betaproteobacteria
GTT
Asn
>WENV180026213
FTIR01392054
56360
Betaproteobacteria
CGA
Ser
>WENV180026228
FTIR01449359
282943
Betaproteobacteria
CTT
Lys
>WENV180026229
FTIR01451712
185257
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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