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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170634473
FYBJ01001426
178510
Alphaproteobacteria
ACG
Arg
>WENV170634498
FYBJ01001505
446430
Alphaproteobacteria
CAC
Val
>WENV170634390
FYBJ01000824
179639
Alphaproteobacteria
ACG
Arg
>WENV170634512
FYBJ01001611
490620
Alphaproteobacteria
CCC
Gly
>WENV170634484
FYBJ01001451
400848
Alphaproteobacteria
GAC
Val
>WENV170634526
FYBJ01001725
400848
Alphaproteobacteria
GAC
Val
>WENV170634550
FYBJ01001910
424450
Alphaproteobacteria
GGT
Thr
>WENV170634353
FYBJ01000328
416697
Alphaproteobacteria
GAC
Val
>WENV170634331
FYBJ01000191
140876
Alphaproteobacteria
>WENV170634518
FYBJ01001627
140876
Alphaproteobacteria
>WENV170634511
FYBJ01001572
179390
Alphaproteobacteria
TGG
Pro
>WENV170634542
FYBJ01001855
481802
Alphaproteobacteria
TCC
Gly
>WENV170634317
FYBJ01000165
178263
Alphaproteobacteria
GTG
His
>WENV170634320
FYBJ01000169
288727
Alphaproteobacteria
>WENV170634462
FYBJ01001407
178731
Alphaproteobacteria
GTC
Asp
>WENV170634411
FYBJ01001103
399480
Alphaproteobacteria
GAA
Phe
>WENV170634531
FYBJ01001749
399480
Alphaproteobacteria
GAA
Phe
>WENV170634561
FYBJ01002139
399480
Alphaproteobacteria
GAA
Phe
>WENV170634416
FYBJ01001169
487436
Alphaproteobacteria
TCC
Gly
>WENV170634410
FYBJ01001072
400384
Alphaproteobacteria
TTC
Glu
>WENV170634472
FYBJ01001423
400384
Alphaproteobacteria
TTC
Glu
>WENV170634318
FYBJ01000165
232927
Alphaproteobacteria
CAT
Met
>WENV170634417
FYBJ01001181
29702
Alphaproteobacteria
GGA
Ser
>WENV170634430
FYBJ01001350
29702
Alphaproteobacteria
GGA
Ser
>WENV170634252
FYBJ01000026
183632
Alphaproteobacteria
GGG
Pro
>WENV170634324
FYBJ01000175
178733
Alphaproteobacteria
CAT
Met
>WENV170634434
FYBJ01001386
427571
Alphaproteobacteria
GCC
Gly
>WENV170634521
FYBJ01001667
178509
Alphaproteobacteria
CCT
Arg
>WENV170634426
FYBJ01001300
179386
Alphaproteobacteria
TCT
Arg
>WENV170634427
FYBJ01001305
29729
Alphaproteobacteria
GCT
Ser
>WENV170634408
FYBJ01001058
179388
Alphaproteobacteria
GTG
His
>WENV170634424
FYBJ01001254
400816
Alphaproteobacteria
TTG
Gln
>WENV170634585
FYBJ01002378
398999
Alphaproteobacteria
GGT
Thr
>WENV170634492
FYBJ01001485
178503
Alphaproteobacteria
GGG
Pro
>WENV170634398
FYBJ01000955
29701
Alphaproteobacteria
CGA
Ser
>WENV170634271
FYBJ01000061
481098
Alphaproteobacteria
CTG
Gln
>WENV170634340
FYBJ01000257
118213
Alphaproteobacteria
TAG
Leu
>WENV170634461
FYBJ01001407
190625
Alphaproteobacteria
ACG
Arg
>WENV170634407
FYBJ01001047
283256
Alphaproteobacteria
CGT
Thr
>WENV170634477
FYBJ01001439
178728
Alphaproteobacteria
CGG
Pro
>WENV170634505
FYBJ01001556
178728
Alphaproteobacteria
CGG
Pro
>WENV170634470
FYBJ01001417
453762
Alphaproteobacteria
CAC
Val
>WENV170634419
FYBJ01001209
453762
Alphaproteobacteria
CAC
Val
>WENV170634261
FYBJ01000037
403581
Alphaproteobacteria
TTG
Gln
>WENV170634556
FYBJ01002036
398994
Alphaproteobacteria
GTT
Asn
>WENV170634555
FYBJ01002011
398994
Alphaproteobacteria
GTT
Asn
>WENV170634490
FYBJ01001478
398994
Alphaproteobacteria
GTT
Asn
>WENV170634432
FYBJ01001381
398994
Alphaproteobacteria
GTT
Asn
>WENV170634405
FYBJ01001028
283255
Alphaproteobacteria
GGC
Ala
>WENV170634272
FYBJ01000061
480900
Alphaproteobacteria
GCA
Cys
>WENV170634339
FYBJ01000245
400386
Alphaproteobacteria
TTG
Gln
>WENV170634504
FYBJ01001544
400386
Alphaproteobacteria
TTG
Gln
>WENV170634380
FYBJ01000806
398996
Alphaproteobacteria
GCC
Gly
>WENV170634381
FYBJ01000806
398996
Alphaproteobacteria
GCC
Gly
>WENV170634515
FYBJ01001627
398996
Alphaproteobacteria
GCC
Gly
>WENV170634516
FYBJ01001627
398996
Alphaproteobacteria
GCC
Gly
>WENV170634517
FYBJ01001627
398996
Alphaproteobacteria
GCC
Gly
>WENV170634402
FYBJ01001000
178505
Alphaproteobacteria
CCG
Arg
>WENV170634481
FYBJ01001448
178505
Alphaproteobacteria
CCG
Arg
>WENV170634557
FYBJ01002037
178505
Alphaproteobacteria
CCG
Arg
>WENV170634507
FYBJ01001567
284796
Alphaproteobacteria
CGT
Thr
>WENV170634519
FYBJ01001628
283257
Alphaproteobacteria
TTT
Lys
>WENV170634522
FYBJ01001670
283257
Alphaproteobacteria
TTT
Lys
>WENV170634559
FYBJ01002107
283257
Alphaproteobacteria
TTT
Lys
>WENV170634570
FYBJ01002184
283257
Alphaproteobacteria
TTT
Lys
>WENV170634475
FYBJ01001430
305449
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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