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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170646401
JQGR01001387
421705
Gammaproteobacteria
TCC
Gly
>WENV170646487
JQGR01014070
421705
Gammaproteobacteria
TCC
Gly
>WENV170646517
JQGR01019580
86762
Gammaproteobacteria
TAA
Leu
>WENV170646413
JQGR01002895
280852
Gammaproteobacteria
GTG
His
>WENV170646477
JQGR01011892
124710
Gammaproteobacteria
TAG
Leu
>WENV170646482
JQGR01013081
210963
Gammaproteobacteria
GAT
Ile
>WENV170646481
JQGR01012682
280808
Gammaproteobacteria
>WENV170646513
JQGR01018017
280808
Gammaproteobacteria
>WENV170646519
JQGR01019657
280808
Gammaproteobacteria
>WENV170646418
JQGR01002915
233569
Gammaproteobacteria
CAT
Met
>WENV170646520
JQGR01019657
233569
Gammaproteobacteria
CAT
Met
>WENV170646512
JQGR01017886
341033
Gammaproteobacteria
GTT
Asn
>WENV170646435
JQGR01004023
176173
Gammaproteobacteria
>WENV170646465
JQGR01009269
176173
Gammaproteobacteria
>WENV170646395
JQGR01001093
56104
Gammaproteobacteria
GGA
Ser
>WENV170646409
JQGR01002729
117798
Gammaproteobacteria
CAA
Leu
>WENV170646417
JQGR01002915
118196
Gammaproteobacteria
GAG
Leu
>WENV170646447
JQGR01006319
280812
Gammaproteobacteria
GAA
Phe
>WENV170646488
JQGR01014145
280812
Gammaproteobacteria
GAA
Phe
>WENV170646500
JQGR01015643
280812
Gammaproteobacteria
GAA
Phe
>WENV170646408
JQGR01002405
180998
Gammaproteobacteria
GAC
Val
>WENV170646410
JQGR01002730
283195
Gammaproteobacteria
GTT
Asn
>WENV170646514
JQGR01018067
282683
Gammaproteobacteria
GGC
Ala
>WENV170646476
JQGR01011892
178437
Gammaproteobacteria
CAT
Met
>WENV170646411
JQGR01002747
335771
Gammaproteobacteria
CAT
Met
>WENV170646381
JQGR01000569
128133
Gammaproteobacteria
GTA
Tyr
>WENV170646518
JQGR01019596
128133
Gammaproteobacteria
GTA
Tyr
>WENV170646467
JQGR01009961
178439
Gammaproteobacteria
GAT
Ile
>WENV170646441
JQGR01004464
176256
Gammaproteobacteria
GAT
Ile
>WENV170646523
JQGR01020256
480411
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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