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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170654469
JRYL01000003
281538
Bacteroidota
GAA
Phe
>WENV170654492
JRYL01000058
303411
Bacteroidota
>WENV170654466
JRYL01000003
364431
Bacteroidota
TCC
Gly
>WENV170654560
JRYL01000855
241605
Bacteroidota
CAT
Met
>WENV170654497
JRYL01000083
216338
Bacteroidota
GTG
His
>WENV170654473
JRYL01000015
155786
Bacteroidota
TGG
Pro
>WENV170654863
JRYL01049203
176812
Bacteroidota
TCT
Arg
>WENV170654650
JRYL01003141
168732
Bacteroidota
TGG
Pro
>WENV170654651
JRYL01003141
231584
Bacteroidota
TCT
Arg
>WENV170654468
JRYL01000003
372845
Bacteroidota
CCA
Trp
>WENV170654525
JRYL01000199
353664
Bacteroidota
TCC
Gly
>WENV170654584
JRYL01001056
353664
Bacteroidota
TCC
Gly
>WENV170654462
JRYL01000003
118418
Bacteroidota
TAG
Leu
>WENV170654604
JRYL01001624
36295
Bacteroidota
GGA
Ser
>WENV170654472
JRYL01000009
187426
Bacteroidota
GGC
Ala
>WENV170654909
JRYL01077822
284068
Bacteroidota
TTT
Lys
>WENV170654500
JRYL01000083
184112
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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