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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170692212
LGOV01000921
140861
Gammaproteobacteria
GTA
Tyr
>WENV170692299
LGOV01002474
178538
Gammaproteobacteria
GTC
Asp
>WENV170692300
LGOV01002474
178538
Gammaproteobacteria
GTC
Asp
>WENV170692302
LGOV01002474
178538
Gammaproteobacteria
GTC
Asp
>WENV170692395
LGOV01005533
282922
Gammaproteobacteria
GAA
Phe
>WENV170692398
LGOV01005533
316728
Gammaproteobacteria
TTT
Lys
>WENV170692399
LGOV01005533
316728
Gammaproteobacteria
TTT
Lys
>WENV170692464
LGOV01008411
8667
Gammaproteobacteria
GCT
Ser
>WENV170692465
LGOV01008411
190706
Gammaproteobacteria
ACG
Arg
>WENV170692466
LGOV01008411
190706
Gammaproteobacteria
ACG
Arg
>WENV170692486
LGOV01009707
487002
Gammaproteobacteria
GCA
Cys
>WENV170692503
LGOV01010979
20410
Gammaproteobacteria
TGA
Ser
>WENV170692504
LGOV01010986
178540
Gammaproteobacteria
TGG
Pro
>WENV170692529
LGOV01011474
73498
Gammaproteobacteria
CAA
Leu
>WENV170692584
LGOV01015161
284693
Gammaproteobacteria
TTC
Glu
>WENV170692728
LGOV01024462
178541
Gammaproteobacteria
CGG
Pro
>WENV170692742
LGOV01025882
197233
Gammaproteobacteria
CAT
Met
>WENV170692743
LGOV01025882
286623
Gammaproteobacteria
GTT
Asn
>WENV170692793
LGOV01031401
178539
Gammaproteobacteria
GAC
Val
>WENV170692804
LGOV01032307
184457
Gammaproteobacteria
GGG
Pro
>WENV170692805
LGOV01032307
118218
Gammaproteobacteria
TAG
Leu
>WENV170692887
LGOV01041841
56412
Gammaproteobacteria
GGA
Ser
>WENV170693103
LGOV01084983
178777
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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