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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705510
LNAO01001365
73113
Gammaproteobacteria
TAA
Leu
>WENV170705395
LNAO01000050
3512
Gammaproteobacteria
>WENV170705581
LNAO01003101
330651
Gammaproteobacteria
TGT
Thr
>WENV170705492
LNAO01001058
176628
Gammaproteobacteria
GGG
Pro
>WENV170705567
LNAO01002686
176628
Gammaproteobacteria
GGG
Pro
>WENV170705453
LNAO01000536
281229
Gammaproteobacteria
GTT
Asn
>WENV170705534
LNAO01001851
281229
Gammaproteobacteria
GTT
Asn
>WENV170705582
LNAO01003104
281229
Gammaproteobacteria
GTT
Asn
>WENV170705515
LNAO01001483
176631
Gammaproteobacteria
CCT
Arg
>WENV170705568
LNAO01002703
176631
Gammaproteobacteria
CCT
Arg
>WENV170705595
LNAO01003479
117929
Gammaproteobacteria
TAG
Leu
>WENV170705493
LNAO01001077
283441
Gammaproteobacteria
>WENV170705562
LNAO01002659
299227
Gammaproteobacteria
GTT
Asn
>WENV170705594
LNAO01003479
313525
Gammaproteobacteria
GTG
His
>WENV170705596
LNAO01003479
313525
Gammaproteobacteria
GTG
His
>WENV170705437
LNAO01000379
56151
Gammaproteobacteria
TGA
Ser
>WENV170705550
LNAO01002175
56151
Gammaproteobacteria
TGA
Ser
>WENV170705459
LNAO01000588
20297
Gammaproteobacteria
TGA
Ser
>WENV170705561
LNAO01002657
20297
Gammaproteobacteria
TGA
Ser
>WENV170705571
LNAO01002925
20297
Gammaproteobacteria
TGA
Ser
>WENV170705458
LNAO01000587
99884
Gammaproteobacteria
GAG
Leu
>WENV170705548
LNAO01002142
280876
Gammaproteobacteria
GGT
Thr
>WENV170705558
LNAO01002496
280876
Gammaproteobacteria
GGT
Thr
>WENV170705546
LNAO01002142
117821
Gammaproteobacteria
GTA
Tyr
>WENV170705438
LNAO01000398
176301
Gammaproteobacteria
GAT
Ile
>WENV170705450
LNAO01000480
117930
Gammaproteobacteria
CAA
Leu
>WENV170705516
LNAO01001516
198082
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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