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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170742640
LULV01000012
481048
Alphaproteobacteria
GCA
Cys
>WENV170742785
LULV01000700
481073
Alphaproteobacteria
CTG
Gln
>WENV170742653
LULV01000036
481074
Alphaproteobacteria
TCC
Gly
>WENV170743014
LULV01006253
435083
Alphaproteobacteria
>WENV170742673
LULV01000108
118247
Alphaproteobacteria
CAA
Leu
>WENV170742678
LULV01000129
400419
Alphaproteobacteria
TTG
Gln
>WENV170742676
LULV01000120
29655
Alphaproteobacteria
TGA
Ser
>WENV170742708
LULV01000189
286018
Alphaproteobacteria
CCA
Trp
>WENV170742642
LULV01000014
422170
Alphaproteobacteria
GGT
Thr
>WENV170742711
LULV01000201
178576
Alphaproteobacteria
ACG
Arg
>WENV170742651
LULV01000036
118150
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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