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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170748584
LUME01000020
480629
Gammaproteobacteria
GCA
Cys
>WENV170748641
LUME01000418
401684
Gammaproteobacteria
CCT
Arg
>WENV170748651
LUME01000463
180679
Gammaproteobacteria
CCA
Trp
>WENV170748681
LUME01000659
176301
Gammaproteobacteria
GAT
Ile
>WENV170748704
LUME01000962
117774
Gammaproteobacteria
GAG
Leu
>WENV170748708
LUME01001017
284022
Gammaproteobacteria
TGT
Thr
>WENV170748713
LUME01001069
180680
Gammaproteobacteria
GAC
Val
>WENV170748717
LUME01001104
281791
Gammaproteobacteria
GTG
His
>WENV170748718
LUME01001166
13452
Gammaproteobacteria
GCT
Ser
>WENV170748737
LUME01001413
481678
Gammaproteobacteria
GCA
Cys
>WENV170748738
LUME01001413
73504
Gammaproteobacteria
TAA
Leu
>WENV170748744
LUME01001472
180678
Gammaproteobacteria
CCG
Arg
>WENV170748772
LUME01001792
178471
Gammaproteobacteria
GTT
Asn
>WENV170748782
LUME01002010
176545
Gammaproteobacteria
CAT
Met
>WENV170748817
LUME01002457
180681
Gammaproteobacteria
TGG
Pro
>WENV170748819
LUME01002457
281908
Gammaproteobacteria
GTG
His
>WENV170748820
LUME01002457
118640
Gammaproteobacteria
TAG
Leu
>WENV170748837
LUME01002719
285547
Gammaproteobacteria
TTG
Gln
>WENV170748896
LUME01004096
300318
Gammaproteobacteria
GGC
Ala
>WENV170748933
LUME01004790
287558
Gammaproteobacteria
TTC
Glu
>WENV170748974
LUME01006022
20618
Gammaproteobacteria
GGA
Ser
>WENV170748977
LUME01006048
180679
Gammaproteobacteria
CCA
Trp
>WENV170749020
LUME01007546
176544
Gammaproteobacteria
CAT
Met
>WENV170749021
LUME01007546
118640
Gammaproteobacteria
TAG
Leu
>WENV170749116
LUME01011556
284022
Gammaproteobacteria
TGT
Thr
>WENV170749118
LUME01011556
401199
Gammaproteobacteria
TCC
Gly
>WENV170749119
LUME01011556
285826
Gammaproteobacteria
GGT
Thr
>WENV170749160
LUME01013625
178164
Gammaproteobacteria
GAT
Ile
>WENV170749194
LUME01016273
46836
Gammaproteobacteria
TAA
Leu
>WENV170749270
LUME01022639
287558
Gammaproteobacteria
TTC
Glu
>WENV170749367
LUME01034114
300318
Gammaproteobacteria
GGC
Ala
>WENV170749393
LUME01036699
180681
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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