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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170760515
LUMT01021195
178510
Alphaproteobacteria
ACG
Arg
>WENV170759544
LUMT01000006
296698
Alphaproteobacteria
CGC
Ala
>WENV170759580
LUMT01000016
481048
Alphaproteobacteria
GCA
Cys
>WENV170760454
LUMT01017404
424450
Alphaproteobacteria
GGT
Thr
>WENV170759530
LUMT01000003
193463
Alphaproteobacteria
CCT
Arg
>WENV170760419
LUMT01014877
140963
Alphaproteobacteria
>WENV170759561
LUMT01000007
20437
Alphaproteobacteria
GGA
Ser
>WENV170759547
LUMT01000006
201940
Alphaproteobacteria
CAT
Met
>WENV170759623
LUMT01000042
481802
Alphaproteobacteria
TCC
Gly
>WENV170759685
LUMT01000165
481073
Alphaproteobacteria
CTG
Gln
>WENV170759526
LUMT01000002
398981
Alphaproteobacteria
GTT
Asn
>WENV170760204
LUMT01005915
197241
Alphaproteobacteria
GGG
Pro
>WENV170760361
LUMT01011487
481268
Alphaproteobacteria
TCC
Gly
>WENV170760105
LUMT01003603
314617
Alphaproteobacteria
TAC
Val
>WENV170759586
LUMT01000020
308662
Alphaproteobacteria
GAA
Phe
>WENV170759539
LUMT01000003
282977
Alphaproteobacteria
CAT
Met
>WENV170759571
LUMT01000013
427571
Alphaproteobacteria
GCC
Gly
>WENV170760112
LUMT01003673
178509
Alphaproteobacteria
CCT
Arg
>WENV170759537
LUMT01000003
192131
Alphaproteobacteria
GTC
Asp
>WENV170759512
LUMT01000002
481074
Alphaproteobacteria
TCC
Gly
>WENV170759545
LUMT01000006
102146
Alphaproteobacteria
GTA
Tyr
>WENV170759973
LUMT01001558
435083
Alphaproteobacteria
>WENV170759506
LUMT01000002
118247
Alphaproteobacteria
CAA
Leu
>WENV170759521
LUMT01000002
29655
Alphaproteobacteria
TGA
Ser
>WENV170759622
LUMT01000042
400517
Alphaproteobacteria
GGT
Thr
>WENV170759502
LUMT01000002
286018
Alphaproteobacteria
CCA
Trp
>WENV170759504
LUMT01000002
422170
Alphaproteobacteria
GGT
Thr
>WENV170759569
LUMT01000013
282981
Alphaproteobacteria
CCA
Trp
>WENV170759509
LUMT01000002
229944
Alphaproteobacteria
CGG
Pro
>WENV170759535
LUMT01000003
229944
Alphaproteobacteria
CGG
Pro
>WENV170759616
LUMT01000035
480900
Alphaproteobacteria
GCA
Cys
>WENV170759505
LUMT01000002
178576
Alphaproteobacteria
ACG
Arg
>WENV170759515
LUMT01000002
118150
Alphaproteobacteria
TAG
Leu
>WENV170759558
LUMT01000007
118150
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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