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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170772079
LXNI01011088
284706
Gammaproteobacteria
GTT
Asn
>WENV170771798
LXNI01004206
487002
Gammaproteobacteria
GCA
Cys
>WENV170771902
LXNI01006030
297858
Gammaproteobacteria
TGC
Ala
>WENV170770726
LXNI01000027
340901
Gammaproteobacteria
CCA
Trp
>WENV170771565
LXNI01002037
480653
Gammaproteobacteria
GCA
Cys
>WENV170772338
LXNI01024706
353123
Gammaproteobacteria
CCA
Trp
>WENV170771982
LXNI01007847
220813
Gammaproteobacteria
CCG
Arg
>WENV170770867
LXNI01000135
222399
Gammaproteobacteria
ACG
Arg
>WENV170770916
LXNI01000214
243308
Gammaproteobacteria
TGG
Pro
>WENV170771586
LXNI01002147
292174
Gammaproteobacteria
GAA
Phe
>WENV170771133
LXNI01000486
177028
Gammaproteobacteria
CAT
Met
>WENV170771995
LXNI01008194
281418
Gammaproteobacteria
TGC
Ala
>WENV170772140
LXNI01012917
176301
Gammaproteobacteria
GAT
Ile
>WENV170771994
LXNI01008194
176301
Gammaproteobacteria
GAT
Ile
>WENV170772149
LXNI01013329
236619
Gammaproteobacteria
GTC
Asp
>WENV170771079
LXNI01000371
201377
Gammaproteobacteria
TGG
Pro
>WENV170772282
LXNI01020656
198943
Gammaproteobacteria
CAT
Met
>WENV170771159
LXNI01000537
119044
Gammaproteobacteria
GTA
Tyr
>WENV170771860
LXNI01005386
119044
Gammaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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