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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170816890
MDSX01039691
402532
Bacteroidota
GCC
Gly
>WENV170819832
MDSX01100184
285360
Bacteroidota
TTT
Lys
>WENV170814916
MDSX01001252
400818
Bacteroidota
TTC
Glu
>WENV170814944
MDSX01001796
400818
Bacteroidota
TTC
Glu
>WENV170815372
MDSX01008865
400818
Bacteroidota
TTC
Glu
>WENV170815581
MDSX01012724
400818
Bacteroidota
TTC
Glu
>WENV170816748
MDSX01036316
400818
Bacteroidota
TTC
Glu
>WENV170817310
MDSX01047937
400818
Bacteroidota
TTC
Glu
>WENV170817771
MDSX01056800
400818
Bacteroidota
TTC
Glu
>WENV170819523
MDSX01094292
400818
Bacteroidota
TTC
Glu
>WENV170816891
MDSX01039691
73133
Bacteroidota
TAA
Leu
>WENV170818224
MDSX01066464
176863
Bacteroidota
CAT
Met
>WENV170819892
MDSX01101388
281538
Bacteroidota
GAA
Phe
>WENV170819786
MDSX01099308
281538
Bacteroidota
GAA
Phe
>WENV170819186
MDSX01087772
281538
Bacteroidota
GAA
Phe
>WENV170817582
MDSX01053366
281538
Bacteroidota
GAA
Phe
>WENV170815953
MDSX01020551
281538
Bacteroidota
GAA
Phe
>WENV170817518
MDSX01052068
120026
Bacteroidota
GTA
Tyr
>WENV170818898
MDSX01081727
120026
Bacteroidota
GTA
Tyr
>WENV170819635
MDSX01096462
156605
Bacteroidota
GAC
Val
>WENV170819394
MDSX01091625
156605
Bacteroidota
GAC
Val
>WENV170818843
MDSX01080357
156605
Bacteroidota
GAC
Val
>WENV170818673
MDSX01076518
156605
Bacteroidota
GAC
Val
>WENV170817866
MDSX01058602
156605
Bacteroidota
GAC
Val
>WENV170817216
MDSX01045934
156605
Bacteroidota
GAC
Val
>WENV170816757
MDSX01036594
156605
Bacteroidota
GAC
Val
>WENV170815556
MDSX01012253
156605
Bacteroidota
GAC
Val
>WENV170815716
MDSX01015806
23370
Bacteroidota
GGA
Ser
>WENV170815477
MDSX01010888
303411
Bacteroidota
>WENV170819385
MDSX01091359
287319
Bacteroidota
TTT
Lys
>WENV170819845
MDSX01100451
281190
Bacteroidota
CAT
Met
>WENV170819748
MDSX01098577
320084
Bacteroidota
TTT
Lys
>WENV170816694
MDSX01035195
209351
Bacteroidota
CAT
Met
>WENV170817201
MDSX01045493
209351
Bacteroidota
CAT
Met
>WENV170819698
MDSX01097637
209351
Bacteroidota
CAT
Met
>WENV170818464
MDSX01072160
282369
Bacteroidota
TTT
Lys
>WENV170816511
MDSX01031560
155786
Bacteroidota
TGG
Pro
>WENV170817152
MDSX01044498
155786
Bacteroidota
TGG
Pro
>WENV170818405
MDSX01070587
155786
Bacteroidota
TGG
Pro
>WENV170819820
MDSX01099759
320669
Bacteroidota
GAA
Phe
>WENV170819317
MDSX01090381
320669
Bacteroidota
GAA
Phe
>WENV170818639
MDSX01075942
320669
Bacteroidota
GAA
Phe
>WENV170816651
MDSX01034302
320669
Bacteroidota
GAA
Phe
>WENV170815423
MDSX01009906
320669
Bacteroidota
GAA
Phe
>WENV170819995
MDSX01103653
336507
Bacteroidota
TCC
Gly
>WENV170818402
MDSX01070522
336507
Bacteroidota
TCC
Gly
>WENV170818389
MDSX01070339
336507
Bacteroidota
TCC
Gly
>WENV170817546
MDSX01052667
336507
Bacteroidota
TCC
Gly
>WENV170817371
MDSX01049057
336507
Bacteroidota
TCC
Gly
>WENV170816622
MDSX01033736
336507
Bacteroidota
TCC
Gly
>WENV170815827
MDSX01017479
336507
Bacteroidota
TCC
Gly
>WENV170819911
MDSX01101917
155808
Bacteroidota
TGG
Pro
>WENV170819910
MDSX01101895
155808
Bacteroidota
TGG
Pro
>WENV170817684
MDSX01055194
155808
Bacteroidota
TGG
Pro
>WENV170817325
MDSX01048412
155808
Bacteroidota
TGG
Pro
>WENV170815340
MDSX01008388
176812
Bacteroidota
TCT
Arg
>WENV170815341
MDSX01008388
176812
Bacteroidota
TCT
Arg
>WENV170815986
MDSX01021356
176812
Bacteroidota
TCT
Arg
>WENV170817458
MDSX01050770
176812
Bacteroidota
TCT
Arg
>WENV170818406
MDSX01070587
176707
Bacteroidota
TCT
Arg
>WENV170820094
MDSX01105731
177083
Bacteroidota
TGT
Thr
>WENV170815406
MDSX01009536
197494
Bacteroidota
GTC
Asp
>WENV170818808
MDSX01079377
399285
Bacteroidota
TTC
Glu
>WENV170816447
MDSX01030602
140868
Bacteroidota
GTA
Tyr
>WENV170818273
MDSX01067508
336000
Bacteroidota
CAT
Met
>WENV170815869
MDSX01018459
299065
Bacteroidota
TTG
Gln
>WENV170819700
MDSX01097674
299065
Bacteroidota
TTG
Gln
>WENV170817092
MDSX01043595
286857
Bacteroidota
TTT
Lys
>WENV170815453
MDSX01010481
286857
Bacteroidota
TTT
Lys
>WENV170819875
MDSX01101066
193718
Bacteroidota
GTC
Asp
>WENV170819859
MDSX01100680
193718
Bacteroidota
GTC
Asp
>WENV170815352
MDSX01008520
21872
Bacteroidota
GGA
Ser
>WENV170819348
MDSX01091016
200516
Bacteroidota
CAT
Met
>WENV170819259
MDSX01089112
181598
Bacteroidota
GTT
Asn
>WENV170819121
MDSX01086040
181598
Bacteroidota
GTT
Asn
>WENV170817451
MDSX01050600
181598
Bacteroidota
GTT
Asn
>WENV170819393
MDSX01091593
284409
Bacteroidota
CAT
Met
>WENV170816154
MDSX01024688
206043
Bacteroidota
GTC
Asp
>WENV170815639
MDSX01013956
206043
Bacteroidota
GTC
Asp
>WENV170815554
MDSX01012216
206043
Bacteroidota
GTC
Asp
>WENV170819294
MDSX01089972
118418
Bacteroidota
TAG
Leu
>WENV170817520
MDSX01052068
399898
Bacteroidota
GGT
Thr
>WENV170816907
MDSX01039941
182234
Bacteroidota
TGT
Thr
>WENV170819825
MDSX01099996
296664
Bacteroidota
GAA
Phe
>WENV170819886
MDSX01101259
176557
Bacteroidota
CAT
Met
>WENV170815017
MDSX01003101
186597
Bacteroidota
GTG
His
>WENV170817798
MDSX01057266
156424
Bacteroidota
TGG
Pro
>WENV170814870
MDSX01000654
179598
Bacteroidota
CAT
Met
>WENV170814867
MDSX01000586
399343
Bacteroidota
TTC
Glu
>WENV170815476
MDSX01010888
399343
Bacteroidota
TTC
Glu
>WENV170817581
MDSX01053343
399343
Bacteroidota
TTC
Glu
>WENV170818499
MDSX01072968
399343
Bacteroidota
TTC
Glu
>WENV170817258
MDSX01046784
56162
Bacteroidota
TGA
Ser
>WENV170817245
MDSX01046627
56162
Bacteroidota
TGA
Ser
>WENV170817211
MDSX01045825
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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