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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170844775
MDTA01012015
178510
Alphaproteobacteria
ACG
Arg
>WENV170850960
MDTA01123837
178510
Alphaproteobacteria
ACG
Arg
>WENV170851163
MDTA01126988
296698
Alphaproteobacteria
CGC
Ala
>WENV170850204
MDTA01110275
282745
Alphaproteobacteria
TAC
Val
>WENV170856101
MDTA01217650
402222
Alphaproteobacteria
GTT
Asn
>WENV170845998
MDTA01034498
334086
Alphaproteobacteria
GGC
Ala
>WENV170848719
MDTA01083766
334086
Alphaproteobacteria
GGC
Ala
>WENV170848505
MDTA01080309
404592
Alphaproteobacteria
GGT
Thr
>WENV170848540
MDTA01080959
140876
Alphaproteobacteria
>WENV170844497
MDTA01007492
201940
Alphaproteobacteria
CAT
Met
>WENV170847000
MDTA01052403
201940
Alphaproteobacteria
CAT
Met
>WENV170847659
MDTA01064930
201940
Alphaproteobacteria
CAT
Met
>WENV170850595
MDTA01116738
201940
Alphaproteobacteria
CAT
Met
>WENV170851232
MDTA01128294
201940
Alphaproteobacteria
CAT
Met
>WENV170851765
MDTA01137462
201940
Alphaproteobacteria
CAT
Met
>WENV170851855
MDTA01138947
201940
Alphaproteobacteria
CAT
Met
>WENV170854122
MDTA01183079
201940
Alphaproteobacteria
CAT
Met
>WENV170852854
MDTA01158474
287529
Alphaproteobacteria
TAC
Val
>WENV170845785
MDTA01030478
290043
Alphaproteobacteria
TGC
Ala
>WENV170849739
MDTA01101466
290043
Alphaproteobacteria
TGC
Ala
>WENV170855957
MDTA01215582
481268
Alphaproteobacteria
TCC
Gly
>WENV170855095
MDTA01200452
280788
Alphaproteobacteria
TTT
Lys
>WENV170846459
MDTA01042853
314617
Alphaproteobacteria
TAC
Val
>WENV170847908
MDTA01070032
314617
Alphaproteobacteria
TAC
Val
>WENV170849444
MDTA01095994
314617
Alphaproteobacteria
TAC
Val
>WENV170850248
MDTA01110844
314617
Alphaproteobacteria
TAC
Val
>WENV170853974
MDTA01179924
314617
Alphaproteobacteria
TAC
Val
>WENV170846294
MDTA01039911
178731
Alphaproteobacteria
GTC
Asp
>WENV170849839
MDTA01103152
75222
Alphaproteobacteria
GAG
Leu
>WENV170856102
MDTA01217650
496447
Alphaproteobacteria
GCA
Cys
>WENV170852882
MDTA01158956
499180
Alphaproteobacteria
TCC
Gly
>WENV170854788
MDTA01195036
232927
Alphaproteobacteria
CAT
Met
>WENV170852346
MDTA01148709
29702
Alphaproteobacteria
GGA
Ser
>WENV170852556
MDTA01152682
29702
Alphaproteobacteria
GGA
Ser
>WENV170849774
MDTA01102142
283596
Alphaproteobacteria
TTC
Glu
>WENV170854434
MDTA01188500
400211
Alphaproteobacteria
>WENV170847031
MDTA01052920
318352
Alphaproteobacteria
CCA
Trp
>WENV170845063
MDTA01017565
210541
Alphaproteobacteria
CAT
Met
>WENV170849197
MDTA01091686
210541
Alphaproteobacteria
CAT
Met
>WENV170845901
MDTA01032611
400544
Alphaproteobacteria
GGT
Thr
>WENV170852701
MDTA01155572
400544
Alphaproteobacteria
GGT
Thr
>WENV170854907
MDTA01197014
419842
Alphaproteobacteria
GCC
Gly
>WENV170852880
MDTA01158956
118137
Alphaproteobacteria
TAG
Leu
>WENV170855763
MDTA01212364
228432
Alphaproteobacteria
TGG
Pro
>WENV170856233
MDTA01219863
228432
Alphaproteobacteria
TGG
Pro
>WENV170854837
MDTA01195662
398994
Alphaproteobacteria
GTT
Asn
>WENV170846173
MDTA01037613
296763
Alphaproteobacteria
CCA
Trp
>WENV170855074
MDTA01200033
84860
Alphaproteobacteria
CAG
Leu
>WENV170847081
MDTA01053913
308123
Alphaproteobacteria
CCA
Trp
>WENV170847493
MDTA01061947
289744
Alphaproteobacteria
CGT
Thr
>WENV170852345
MDTA01148695
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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