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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180050589
MPLU02152506
179283
Gammaproteobacteria
ACG
Arg
>WENV180050590
MPLU02152506
179283
Gammaproteobacteria
ACG
Arg
>WENV180052773
MPLU02323563
242732
Gammaproteobacteria
ACG
Arg
>WENV180052774
MPLU02323563
242732
Gammaproteobacteria
ACG
Arg
>WENV180049029
MPLU02028964
118371
Gammaproteobacteria
CAA
Leu
>WENV180050787
MPLU02169879
176554
Gammaproteobacteria
CAT
Met
>WENV180049094
MPLU02033695
178472
Gammaproteobacteria
CAT
Met
>WENV180051348
MPLU02207367
178472
Gammaproteobacteria
CAT
Met
>WENV180048836
MPLU02015667
178466
Gammaproteobacteria
CCA
Trp
>WENV180052446
MPLU02299395
180679
Gammaproteobacteria
CCA
Trp
>WENV180051178
MPLU02196201
211156
Gammaproteobacteria
CGG
Pro
>WENV180050949
MPLU02182328
346373
Gammaproteobacteria
GAA
Phe
>WENV180051395
MPLU02211063
204522
Gammaproteobacteria
GAT
Ile
>WENV180053140
MPLU02349081
176301
Gammaproteobacteria
GAT
Ile
>WENV180051866
MPLU02249531
176301
Gammaproteobacteria
GAT
Ile
>WENV180048761
MPLU02007035
176301
Gammaproteobacteria
GAT
Ile
>WENV180049739
MPLU02082096
176301
Gammaproteobacteria
GAT
Ile
>WENV180052526
MPLU02305307
483085
Gammaproteobacteria
GCA
Cys
>WENV180050085
MPLU02109109
480629
Gammaproteobacteria
GCA
Cys
>WENV180050081
MPLU02108836
481678
Gammaproteobacteria
GCA
Cys
>WENV180051859
MPLU02249278
491391
Gammaproteobacteria
GCA
Cys
>WENV180052204
MPLU02276302
481250
Gammaproteobacteria
GCA
Cys
>WENV180049386
MPLU02056448
376208
Gammaproteobacteria
GCC
Gly
>WENV180049387
MPLU02056448
376208
Gammaproteobacteria
GCC
Gly
>WENV180051858
MPLU02249278
376208
Gammaproteobacteria
GCC
Gly
>WENV180052203
MPLU02276302
376208
Gammaproteobacteria
GCC
Gly
>WENV180050588
MPLU02152506
8635
Gammaproteobacteria
GCT
Ser
>WENV180049927
MPLU02097542
282683
Gammaproteobacteria
GGC
Ala
>WENV180052316
MPLU02287946
370389
Gammaproteobacteria
GGC
Ala
>WENV180049563
MPLU02069275
300318
Gammaproteobacteria
GGC
Ala
>WENV180050206
MPLU02118386
176663
Gammaproteobacteria
GGG
Pro
>WENV180052581
MPLU02309790
328691
Gammaproteobacteria
GGT
Thr
>WENV180052579
MPLU02309790
118205
Gammaproteobacteria
GTA
Tyr
>WENV180052505
MPLU02304667
281908
Gammaproteobacteria
GTG
His
>WENV180050743
MPLU02164895
291402
Gammaproteobacteria
GTG
His
>WENV180050385
MPLU02134178
178471
Gammaproteobacteria
GTT
Asn
>WENV180050386
MPLU02134178
178471
Gammaproteobacteria
GTT
Asn
>WENV180051353
MPLU02207420
178471
Gammaproteobacteria
GTT
Asn
>WENV180052552
MPLU02307416
178471
Gammaproteobacteria
GTT
Asn
>WENV180052553
MPLU02307416
178471
Gammaproteobacteria
GTT
Asn
>WENV180051212
MPLU02198220
296680
Gammaproteobacteria
GTT
Asn
>WENV180050082
MPLU02108836
92638
Gammaproteobacteria
TAA
Leu
>WENV180052205
MPLU02276302
73504
Gammaproteobacteria
TAA
Leu
>WENV180049929
MPLU02097542
283227
Gammaproteobacteria
TAC
Val
>WENV180050315
MPLU02127155
283227
Gammaproteobacteria
TAC
Val
>WENV180050316
MPLU02127155
283227
Gammaproteobacteria
TAC
Val
>WENV180049095
MPLU02033695
121740
Gammaproteobacteria
TAG
Leu
>WENV180052506
MPLU02304667
118640
Gammaproteobacteria
TAG
Leu
>WENV180048723
MPLU02003826
20487
Gammaproteobacteria
TGA
Ser
>WENV180051867
MPLU02249531
292006
Gammaproteobacteria
TGC
Ala
>WENV180051615
MPLU02230957
178473
Gammaproteobacteria
TGG
Pro
>WENV180052504
MPLU02304667
180681
Gammaproteobacteria
TGG
Pro
>WENV180052507
MPLU02304667
180681
Gammaproteobacteria
TGG
Pro
>WENV180052738
MPLU02322222
180681
Gammaproteobacteria
TGG
Pro
>WENV180049093
MPLU02033695
441770
Gammaproteobacteria
TTG
Gln
>WENV180049230
MPLU02044871
330451
Gammaproteobacteria
TTG
Gln
>WENV180049096
MPLU02033695
411344
Gammaproteobacteria
TTG
Gln
>WENV180050757
MPLU02166219
285547
Gammaproteobacteria
TTG
Gln
>WENV180049303
MPLU02049920
283223
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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