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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180081657
MPMC02136661
140893
Alphaproteobacteria
CAA
Leu
>WENV180081625
MPMC02132620
100185
Alphaproteobacteria
GAG
Leu
>WENV180082818
MPMC02261410
400514
Alphaproteobacteria
TTG
Gln
>WENV180082441
MPMC02222501
29729
Alphaproteobacteria
GCT
Ser
>WENV180081786
MPMC02149785
176153
Alphaproteobacteria
CAT
Met
>WENV180080876
MPMC02062171
73167
Alphaproteobacteria
GAG
Leu
>WENV180081475
MPMC02119762
399408
Alphaproteobacteria
TGT
Thr
>WENV180082233
MPMC02198796
480900
Alphaproteobacteria
GCA
Cys
>WENV180082546
MPMC02233537
29482
Alphaproteobacteria
CGA
Ser
>WENV180080873
MPMC02061713
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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