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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170965380
MTEU01001666
178431
Betaproteobacteria
GAT
Ile
>WENV170965602
MTEU01004724
208822
Betaproteobacteria
TTG
Gln
>WENV170965377
MTEU01001602
178122
Betaproteobacteria
TGG
Pro
>WENV170965464
MTEU01002882
283193
Betaproteobacteria
CCA
Trp
>WENV170965656
MTEU01005530
118105
Betaproteobacteria
CAA
Leu
>WENV170965452
MTEU01002615
305239
Betaproteobacteria
TTT
Lys
>WENV170965378
MTEU01001602
208821
Betaproteobacteria
TCT
Arg
>WENV170965671
MTEU01005808
111196
Betaproteobacteria
GTA
Tyr
>WENV170965594
MTEU01004414
400381
Betaproteobacteria
CCT
Arg
>WENV170965270
MTEU01000129
452715
Betaproteobacteria
GGT
Thr
>WENV170965623
MTEU01005019
400382
Betaproteobacteria
CCC
Gly
>WENV170965553
MTEU01004114
5917
Betaproteobacteria
GCT
Ser
>WENV170965524
MTEU01003630
8602
Betaproteobacteria
GCT
Ser
>WENV170965400
MTEU01002032
289440
Betaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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