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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180107851
OAPH01013698
360947
Alphaproteobacteria
TTT
Lys
>WENV180108036
OAPH01034964
424450
Alphaproteobacteria
GGT
Thr
>WENV180108011
OAPH01030712
140963
Alphaproteobacteria
>WENV180107656
OAPH01001498
201940
Alphaproteobacteria
CAT
Met
>WENV180107753
OAPH01005674
201940
Alphaproteobacteria
CAT
Met
>WENV180107948
OAPH01022181
197241
Alphaproteobacteria
GGG
Pro
>WENV180107959
OAPH01023933
197241
Alphaproteobacteria
GGG
Pro
>WENV180107921
OAPH01019272
481268
Alphaproteobacteria
TCC
Gly
>WENV180108086
OAPH01041292
509917
Alphaproteobacteria
TCC
Gly
>WENV180107699
OAPH01002452
75222
Alphaproteobacteria
GAG
Leu
>WENV180107872
OAPH01014869
178339
Alphaproteobacteria
CCG
Arg
>WENV180108188
OAPH01061563
180029
Alphaproteobacteria
CAT
Met
>WENV180108070
OAPH01038796
179941
Alphaproteobacteria
CAT
Met
>WENV180108008
OAPH01029587
178337
Alphaproteobacteria
GTG
His
>WENV180107710
OAPH01002762
435083
Alphaproteobacteria
>WENV180108256
OAPH01076952
281650
Alphaproteobacteria
CCA
Trp
>WENV180107909
OAPH01018704
195764
Alphaproteobacteria
ACG
Arg
>WENV180108644
OAPH01223154
427428
Alphaproteobacteria
GCC
Gly
>WENV180108089
OAPH01041588
398994
Alphaproteobacteria
GTT
Asn
>WENV180107856
OAPH01013982
353624
Alphaproteobacteria
CCA
Trp
>WENV180107687
OAPH01002024
310632
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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