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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180115399
OAPT01000324
176301
Gammaproteobacteria
GAT
Ile
>WENV180115417
OAPT01000586
480629
Gammaproteobacteria
GCA
Cys
>WENV180115567
OAPT01007982
291401
Gammaproteobacteria
TGC
Ala
>WENV180115590
OAPT01009740
291402
Gammaproteobacteria
GTG
His
>WENV180115629
OAPT01013680
281791
Gammaproteobacteria
GTG
His
>WENV180115641
OAPT01014951
184784
Gammaproteobacteria
TGG
Pro
>WENV180115725
OAPT01024961
289050
Gammaproteobacteria
CCA
Trp
>WENV180115885
OAPT01058611
282018
Gammaproteobacteria
TGT
Thr
>WENV180116064
OAPT01113876
280699
Gammaproteobacteria
GGT
Thr
>WENV180116134
OAPT01145224
185999
Gammaproteobacteria
CCG
Arg
>WENV180116164
OAPT01161128
281939
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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