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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
132 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180136946
OATO01000034
176499
Actinomycetota
CAT
Met
>WENV180137010
OATO01000086
176499
Actinomycetota
CAT
Met
>WENV180137044
OATO01000122
176499
Actinomycetota
CAT
Met
>WENV180137079
OATO01000203
175883
Actinomycetota
GAT
Ile
>WENV180137081
OATO01000203
175883
Actinomycetota
GAT
Ile
>WENV180137005
OATO01000081
175907
Actinomycetota
TAC
Val
>WENV180137068
OATO01000182
283311
Actinomycetota
CCT
Arg
>WENV180137426
OATO01022664
449634
Actinomycetota
CTG
Gln
>WENV180137332
OATO01007710
31036
Actinomycetota
GCT
Ser
>WENV180136990
OATO01000065
147806
Actinomycetota
TAA
Leu
>WENV180136896
OATO01000007
280498
Actinomycetota
GTT
Asn
>WENV180136897
OATO01000007
280498
Actinomycetota
GTT
Asn
>WENV180136899
OATO01000007
280498
Actinomycetota
GTT
Asn
>WENV180136992
OATO01000067
280498
Actinomycetota
GTT
Asn
>WENV180136993
OATO01000067
280498
Actinomycetota
GTT
Asn
>WENV180136953
OATO01000039
316729
Actinomycetota
CAC
Val
>WENV180136892
OATO01000004
316729
Actinomycetota
CAC
Val
>WENV180137161
OATO01000597
280503
Actinomycetota
CCT
Arg
>WENV180137476
OATO01039773
184065
Actinomycetota
TGG
Pro
>WENV180136888
OATO01000004
295964
Actinomycetota
GTT
Asn
>WENV180136991
OATO01000067
295964
Actinomycetota
GTT
Asn
>WENV180136882
OATO01000003
459899
Actinomycetota
TTC
Glu
>WENV180136959
OATO01000044
56083
Actinomycetota
CGA
Ser
>WENV180136988
OATO01000064
140768
Actinomycetota
TAG
Leu
>WENV180137017
OATO01000096
140768
Actinomycetota
TAG
Leu
>WENV180136970
OATO01000054
56384
Actinomycetota
TGA
Ser
>WENV180136994
OATO01000068
176075
Actinomycetota
TCT
Arg
>WENV180136933
OATO01000024
176075
Actinomycetota
TCT
Arg
>WENV180136948
OATO01000036
175848
Actinomycetota
TGG
Pro
>WENV180137312
OATO01005414
180946
Actinomycetota
TTT
Lys
>WENV180137078
OATO01000202
176078
Actinomycetota
GGG
Pro
>WENV180137090
OATO01000241
176078
Actinomycetota
GGG
Pro
>WENV180136974
OATO01000058
20208
Actinomycetota
GAG
Leu
>WENV180137012
OATO01000091
59689
Actinomycetota
GGA
Ser
>WENV180137061
OATO01000165
59689
Actinomycetota
GGA
Ser
>WENV180136931
OATO01000023
175837
Actinomycetota
ACG
Arg
>WENV180136935
OATO01000025
175837
Actinomycetota
ACG
Arg
>WENV180136936
OATO01000025
175837
Actinomycetota
ACG
Arg
>WENV180136978
OATO01000060
175837
Actinomycetota
ACG
Arg
>WENV180136979
OATO01000060
175837
Actinomycetota
ACG
Arg
>WENV180137011
OATO01000086
29393
Actinomycetota
GCT
Ser
>WENV180137003
OATO01000080
280549
Actinomycetota
CAC
Val
>WENV180137136
OATO01000395
280549
Actinomycetota
CAC
Val
>WENV180137306
OATO01005050
443526
Actinomycetota
CAC
Val
>WENV180136947
OATO01000034
24925
Actinomycetota
GCT
Ser
>WENV180136995
OATO01000069
349164
Actinomycetota
CTC
Glu
>WENV180137075
OATO01000194
349164
Actinomycetota
CTC
Glu
>WENV180137127
OATO01000374
56383
Actinomycetota
CGA
Ser
>WENV180136976
OATO01000060
280702
Actinomycetota
GGC
Ala
>WENV180136977
OATO01000060
280702
Actinomycetota
GGC
Ala
>WENV180136941
OATO01000031
140878
Actinomycetota
TAA
Leu
>WENV180137482
OATO01040700
6108
Actinomycetota
TAT
Ile
>WENV180137030
OATO01000112
398843
Actinomycetota
GTT
Asn
>WENV180137029
OATO01000112
398843
Actinomycetota
GTT
Asn
>WENV180137002
OATO01000080
434162
Actinomycetota
GAC
Val
>WENV180137135
OATO01000395
434162
Actinomycetota
GAC
Val
>WENV180136962
OATO01000045
176077
Actinomycetota
CAT
Met
>WENV180136934
OATO01000024
283312
Actinomycetota
GTG
His
>WENV180137046
OATO01000123
241064
Actinomycetota
CTC
Glu
>WENV180136968
OATO01000052
241064
Actinomycetota
CTC
Glu
>WENV180136967
OATO01000052
241064
Actinomycetota
CTC
Glu
>WENV180137033
OATO01000114
176638
Actinomycetota
GGG
Pro
>WENV180136917
OATO01000014
280524
Actinomycetota
TGC
Ala
>WENV180137104
OATO01000275
280524
Actinomycetota
TGC
Ala
>WENV180137157
OATO01000525
280524
Actinomycetota
TGC
Ala
>WENV180137225
OATO01001853
481719
Actinomycetota
GCA
Cys
>WENV180136997
OATO01000069
283313
Actinomycetota
CCG
Arg
>WENV180136957
OATO01000044
398948
Actinomycetota
TTC
Glu
>WENV180137057
OATO01000158
398948
Actinomycetota
TTC
Glu
>WENV180137295
OATO01004262
176723
Actinomycetota
TCT
Arg
>WENV180137292
OATO01004164
291585
Actinomycetota
GCC
Gly
>WENV180137226
OATO01001853
291585
Actinomycetota
GCC
Gly
>WENV180137224
OATO01001853
291585
Actinomycetota
GCC
Gly
>WENV180136949
OATO01000036
150272
Actinomycetota
TAA
Leu
>WENV180136945
OATO01000034
117777
Actinomycetota
>WENV180137009
OATO01000086
117777
Actinomycetota
>WENV180137342
OATO01008664
507958
Actinomycetota
CCC
Gly
>WENV180136886
OATO01000004
280523
Actinomycetota
GGC
Ala
>WENV180136898
OATO01000007
280523
Actinomycetota
GGC
Ala
>WENV180136954
OATO01000039
280523
Actinomycetota
GGC
Ala
>WENV180137158
OATO01000525
280523
Actinomycetota
GGC
Ala
>WENV180136937
OATO01000027
227544
Actinomycetota
TAC
Val
>WENV180136884
OATO01000003
176555
Actinomycetota
CAT
Met
>WENV180137421
OATO01020597
186871
Actinomycetota
CTT
Lys
>WENV180136969
OATO01000053
191955
Actinomycetota
TGT
Thr
>WENV180137450
OATO01030981
221845
Actinomycetota
GAT
Ile
>WENV180136966
OATO01000048
20415
Actinomycetota
GAG
Leu
>WENV180137453
OATO01033647
301059
Actinomycetota
TCT
Arg
>WENV180137022
OATO01000100
280536
Actinomycetota
CTT
Lys
>WENV180137021
OATO01000100
280536
Actinomycetota
CTT
Lys
>WENV180137018
OATO01000096
280496
Actinomycetota
CGT
Thr
>WENV180136963
OATO01000045
280703
Actinomycetota
CCT
Arg
>WENV180137146
OATO01000406
140879
Actinomycetota
TAG
Leu
>WENV180137102
OATO01000274
175926
Actinomycetota
CAT
Met
>WENV180137066
OATO01000179
178569
Actinomycetota
CAT
Met
>WENV180136878
OATO01000002
280450
Actinomycetota
TTT
Lys
>WENV180137016
OATO01000096
323758
Actinomycetota
CGT
Thr
>WENV180137008
OATO01000082
56166
Actinomycetota
TGA
Ser
>WENV180137064
OATO01000168
358727
Actinomycetota
CCG
Arg
>WENV180137089
OATO01000239
358727
Actinomycetota
CCG
Arg
>WENV180137349
OATO01010192
358727
Actinomycetota
CCG
Arg
>WENV180137151
OATO01000439
480329
Actinomycetota
CCC
Gly
>WENV180137028
OATO01000111
480329
Actinomycetota
CCC
Gly
>WENV180137045
OATO01000123
483206
Actinomycetota
CTG
Gln
>WENV180137152
OATO01000453
175882
Actinomycetota
TGG
Pro
>WENV180137052
OATO01000137
99865
Actinomycetota
CAG
Leu
>WENV180137172
OATO01000682
99865
Actinomycetota
CAG
Leu
>WENV180136951
OATO01000039
222475
Actinomycetota
CTT
Lys
>WENV180137047
OATO01000125
222475
Actinomycetota
CTT
Lys
>WENV180137034
OATO01000114
480319
Actinomycetota
TTG
Gln
>WENV180136905
OATO01000009
280499
Actinomycetota
CCT
Arg
>WENV180136877
OATO01000002
398853
Actinomycetota
CTG
Gln
>WENV180136996
OATO01000069
398853
Actinomycetota
CTG
Gln
>WENV180137076
OATO01000194
398853
Actinomycetota
CTG
Gln
>WENV180137048
OATO01000126
176642
Actinomycetota
CAA
Leu
>WENV180136942
OATO01000031
175843
Actinomycetota
CAA
Leu
>WENV180136950
OATO01000036
175843
Actinomycetota
CAA
Leu
>WENV180136904
OATO01000009
237585
Actinomycetota
TAC
Val
>WENV180136885
OATO01000003
203883
Actinomycetota
TCT
Arg
>WENV180136960
OATO01000044
56075
Actinomycetota
TGA
Ser
>WENV180137398
OATO01016202
371116
Actinomycetota
GGC
Ala
>WENV180137007
OATO01000082
46642
Actinomycetota
CGA
Ser
>WENV180137181
OATO01000840
104211
Actinomycetota
CAG
Leu
>WENV180136932
OATO01000023
178568
Actinomycetota
ACG
Arg
>WENV180137043
OATO01000122
117903
Actinomycetota
GTA
Tyr
>WENV180137103
OATO01000275
179238
Actinomycetota
GAT
Ile
>WENV180137321
OATO01006345
147796
Actinomycetota
TAA
Leu
>WENV180136887
OATO01000004
506175
Actinomycetota
TTG
Gln
>WENV180136975
OATO01000060
506175
Actinomycetota
TTG
Gln
>WENV180137145
OATO01000406
280470
Actinomycetota
CGT
Thr
>WENV180136987
OATO01000064
280470
Actinomycetota
CGT
Thr
>WENV180137110
OATO01000295
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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