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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180275356
OBHT01013619
184105
Campylobacterota
GAT
Ile
>WENV180275255
OBHT01000857
220633
Campylobacterota
TCC
Gly
>WENV180275273
OBHT01001436
220633
Campylobacterota
TCC
Gly
>WENV180275238
OBHT01000316
188352
Campylobacterota
GTC
Asp
>WENV180275253
OBHT01000857
184108
Campylobacterota
TGT
Thr
>WENV180275237
OBHT01000316
294045
Campylobacterota
TAC
Val
>WENV180275491
OBHT01046582
294045
Campylobacterota
TAC
Val
>WENV180275497
OBHT01048688
289267
Campylobacterota
TAC
Val
>WENV180275301
OBHT01002163
289268
Campylobacterota
TGC
Ala
>WENV180275394
OBHT01021174
289268
Campylobacterota
TGC
Ala
>WENV180275498
OBHT01048688
184104
Campylobacterota
GTC
Asp
>WENV180275323
OBHT01006458
176586
Campylobacterota
CAT
Met
>WENV180275518
OBHT01055957
176586
Campylobacterota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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