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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
152 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180323680
OBKR01056366
343590
Bacillota
GCC
Gly
>WENV180323147
OBKR01015524
234991
Bacillota
GAT
Ile
>WENV180322555
OBKR01003558
404076
Bacillota
GCC
Gly
>WENV180323894
OBKR01093246
280500
Bacillota
TGC
Ala
>WENV180324111
OBKR01160094
280500
Bacillota
TGC
Ala
>WENV180322680
OBKR01004710
349107
Bacillota
GCC
Gly
>WENV180322788
OBKR01006324
349107
Bacillota
GCC
Gly
>WENV180323537
OBKR01041799
349107
Bacillota
GCC
Gly
>WENV180323749
OBKR01066611
349107
Bacillota
GCC
Gly
>WENV180324199
OBKR01190999
349107
Bacillota
GCC
Gly
>WENV180323605
OBKR01048114
184504
Bacillota
GTC
Asp
>WENV180323750
OBKR01066611
405363
Bacillota
GCA
Cys
>WENV180322762
OBKR01005858
290391
Bacillota
TAC
Val
>WENV180322220
OBKR01001634
290391
Bacillota
TAC
Val
>WENV180324198
OBKR01190999
280428
Bacillota
GAA
Phe
>WENV180322924
OBKR01008651
280428
Bacillota
GAA
Phe
>WENV180321402
OBKR01000043
280428
Bacillota
GAA
Phe
>WENV180323372
OBKR01027089
405357
Bacillota
TTC
Glu
>WENV180321336
OBKR01000017
405357
Bacillota
TTC
Glu
>WENV180323394
OBKR01028152
291579
Bacillota
GAA
Phe
>WENV180323246
OBKR01020087
229015
Bacillota
GTG
His
>WENV180321944
OBKR01000806
179917
Bacillota
CAT
Met
>WENV180324351
OBKR01295869
280466
Bacillota
TAC
Val
>WENV180324335
OBKR01294923
426579
Bacillota
GTT
Asn
>WENV180323514
OBKR01039029
280492
Bacillota
CTT
Lys
>WENV180323865
OBKR01089633
175842
Bacillota
CAC
Val
>WENV180321786
OBKR01000454
291629
Bacillota
CCA
Trp
>WENV180323278
OBKR01021506
236579
Bacillota
GAT
Ile
>WENV180324047
OBKR01133636
348419
Bacillota
GTT
Asn
>WENV180323817
OBKR01078848
348419
Bacillota
GTT
Asn
>WENV180323288
OBKR01021956
348419
Bacillota
GTT
Asn
>WENV180323664
OBKR01054815
179563
Bacillota
GAT
Ile
>WENV180323198
OBKR01017491
179176
Bacillota
ACG
Arg
>WENV180322677
OBKR01004670
179176
Bacillota
ACG
Arg
>WENV180323747
OBKR01066144
352588
Bacillota
CAT
Met
>WENV180323277
OBKR01021506
295166
Bacillota
TGC
Ala
>WENV180323148
OBKR01015524
295166
Bacillota
TGC
Ala
>WENV180322392
OBKR01002551
404079
Bacillota
CAT
Met
>WENV180322819
OBKR01006948
73664
Bacillota
CAG
Leu
>WENV180322140
OBKR01001325
73664
Bacillota
CAG
Leu
>WENV180321510
OBKR01000091
73664
Bacillota
CAG
Leu
>WENV180323947
OBKR01106854
280447
Bacillota
GAC
Val
>WENV180323601
OBKR01047740
5692
Bacillota
GCT
Ser
>WENV180321828
OBKR01000542
312274
Bacillota
GGC
Ala
>WENV180324374
OBKR01302137
186123
Bacillota
GTC
Asp
>WENV180321784
OBKR01000454
186123
Bacillota
GTC
Asp
>WENV180323746
OBKR01065991
175825
Bacillota
GAT
Ile
>WENV180321400
OBKR01000043
280427
Bacillota
TAC
Val
>WENV180322749
OBKR01005624
284723
Bacillota
TAC
Val
>WENV180323799
OBKR01076511
73009
Bacillota
CAG
Leu
>WENV180323596
OBKR01047415
481217
Bacillota
GCA
Cys
>WENV180322579
OBKR01003693
481217
Bacillota
GCA
Cys
>WENV180322437
OBKR01002836
481217
Bacillota
GCA
Cys
>WENV180323875
OBKR01090932
189473
Bacillota
GAT
Ile
>WENV180323934
OBKR01102174
291581
Bacillota
CGG
Pro
>WENV180324099
OBKR01152982
175859
Bacillota
TCT
Arg
>WENV180323745
OBKR01065991
280436
Bacillota
TGC
Ala
>WENV180323366
OBKR01026778
280436
Bacillota
TGC
Ala
>WENV180323112
OBKR01014146
175847
Bacillota
GTC
Asp
>WENV180324266
OBKR01229340
345524
Bacillota
TGC
Ala
>WENV180323651
OBKR01054301
290325
Bacillota
GCC
Gly
>WENV180322793
OBKR01006397
290325
Bacillota
GCC
Gly
>WENV180323963
OBKR01109091
175831
Bacillota
ACG
Arg
>WENV180323663
OBKR01054815
353153
Bacillota
TGC
Ala
>WENV180323086
OBKR01013452
284627
Bacillota
GAA
Phe
>WENV180324178
OBKR01178759
284627
Bacillota
GAA
Phe
>WENV180324333
OBKR01294754
291634
Bacillota
GAA
Phe
>WENV180324261
OBKR01226707
399041
Bacillota
CCA
Trp
>WENV180322735
OBKR01005482
183957
Bacillota
CCT
Arg
>WENV180322167
OBKR01001411
346451
Bacillota
TTT
Lys
>WENV180323933
OBKR01102174
480322
Bacillota
CTG
Gln
>WENV180323454
OBKR01033157
480322
Bacillota
CTG
Gln
>WENV180324367
OBKR01301810
175868
Bacillota
GTT
Asn
>WENV180323546
OBKR01042341
175868
Bacillota
GTT
Asn
>WENV180323381
OBKR01027366
175868
Bacillota
GTT
Asn
>WENV180323375
OBKR01027142
175868
Bacillota
GTT
Asn
>WENV180324220
OBKR01200172
284744
Bacillota
TTT
Lys
>WENV180323956
OBKR01108518
314834
Bacillota
TGC
Ala
>WENV180324187
OBKR01185931
322848
Bacillota
CTT
Lys
>WENV180323782
OBKR01073826
398854
Bacillota
CTC
Glu
>WENV180323547
OBKR01042516
398854
Bacillota
CTC
Glu
>WENV180323545
OBKR01042341
398854
Bacillota
CTC
Glu
>WENV180323374
OBKR01027142
398854
Bacillota
CTC
Glu
>WENV180323513
OBKR01038988
291576
Bacillota
CCC
Gly
>WENV180323329
OBKR01024619
480324
Bacillota
TTG
Gln
>WENV180324309
OBKR01262430
497729
Bacillota
CCA
Trp
>WENV180322671
OBKR01004489
497729
Bacillota
CCA
Trp
>WENV180322337
OBKR01002241
497729
Bacillota
CCA
Trp
>WENV180321850
OBKR01000581
497729
Bacillota
CCA
Trp
>WENV180321827
OBKR01000541
497729
Bacillota
CCA
Trp
>WENV180324130
OBKR01166026
175899
Bacillota
GTC
Asp
>WENV180323884
OBKR01091873
175899
Bacillota
GTC
Asp
>WENV180322731
OBKR01005461
303718
Bacillota
TGT
Thr
>WENV180321937
OBKR01000797
303718
Bacillota
TGT
Thr
>WENV180324212
OBKR01196719
56079
Bacillota
AAG
Leu
>WENV180323323
OBKR01024421
186051
Bacillota
GAT
Ile
>WENV180323344
OBKR01025715
398857
Bacillota
TTC
Glu
>WENV180322832
OBKR01007113
204381
Bacillota
GAT
Ile
>WENV180322325
OBKR01002147
204381
Bacillota
GAT
Ile
>WENV180323765
OBKR01068927
280444
Bacillota
GGT
Thr
>WENV180323643
OBKR01052933
280444
Bacillota
GGT
Thr
>WENV180323527
OBKR01040094
280444
Bacillota
GGT
Thr
>WENV180323912
OBKR01097211
317482
Bacillota
TAC
Val
>WENV180323771
OBKR01069939
354380
Bacillota
TTT
Lys
>WENV180323971
OBKR01112809
342104
Bacillota
TAC
Val
>WENV180321263
OBKR01000002
223045
Bacillota
GAT
Ile
>WENV180323011
OBKR01011252
179755
Bacillota
CCG
Arg
>WENV180322592
OBKR01003766
179755
Bacillota
CCG
Arg
>WENV180324221
OBKR01200172
401111
Bacillota
TTC
Glu
>WENV180322665
OBKR01004409
58120
Bacillota
AAG
Leu
>WENV180323130
OBKR01014882
46835
Bacillota
TAA
Leu
>WENV180323094
OBKR01013735
46835
Bacillota
TAA
Leu
>WENV180324006
OBKR01119987
398832
Bacillota
TTC
Glu
>WENV180322242
OBKR01001748
398832
Bacillota
TTC
Glu
>WENV180323404
OBKR01028969
25955
Bacillota
GCT
Ser
>WENV180324146
OBKR01170129
118669
Bacillota
GTA
Tyr
>WENV180323084
OBKR01013452
118669
Bacillota
GTA
Tyr
>WENV180322330
OBKR01002196
118669
Bacillota
GTA
Tyr
>WENV180321469
OBKR01000075
118669
Bacillota
GTA
Tyr
>WENV180323347
OBKR01025715
175915
Bacillota
GTC
Asp
>WENV180323267
OBKR01020898
280476
Bacillota
TTT
Lys
>WENV180322407
OBKR01002625
280476
Bacillota
TTT
Lys
>WENV180322043
OBKR01001030
280476
Bacillota
TTT
Lys
>WENV180321707
OBKR01000296
280476
Bacillota
TTT
Lys
>WENV180324305
OBKR01257178
280462
Bacillota
GAA
Phe
>WENV180321538
OBKR01000115
398852
Bacillota
CTC
Glu
>WENV180321537
OBKR01000115
398852
Bacillota
CTC
Glu
>WENV180321498
OBKR01000086
398852
Bacillota
CTC
Glu
>WENV180323531
OBKR01040988
118359
Bacillota
GTA
Tyr
>WENV180324161
OBKR01175997
201856
Bacillota
GAT
Ile
>WENV180322884
OBKR01007774
289123
Bacillota
GGT
Thr
>WENV180323390
OBKR01028152
321248
Bacillota
TAC
Val
>WENV180321651
OBKR01000220
321248
Bacillota
TAC
Val
>WENV180322851
OBKR01007375
280483
Bacillota
GAA
Phe
>WENV180322328
OBKR01002167
285601
Bacillota
TTC
Glu
>WENV180324142
OBKR01169199
175857
Bacillota
GTG
His
>WENV180322696
OBKR01005005
175857
Bacillota
GTG
His
>WENV180322159
OBKR01001394
175857
Bacillota
GTG
His
>WENV180322765
OBKR01005858
285756
Bacillota
GCC
Gly
>WENV180322221
OBKR01001634
285756
Bacillota
GCC
Gly
>WENV180323917
OBKR01098288
398833
Bacillota
TGT
Thr
>WENV180323576
OBKR01045773
398833
Bacillota
TGT
Thr
>WENV180324019
OBKR01122686
285556
Bacillota
TGT
Thr
>WENV180324315
OBKR01272441
175849
Bacillota
GTC
Asp
>WENV180321895
OBKR01000678
317820
Bacillota
TAC
Val
>WENV180322404
OBKR01002625
179166
Bacillota
TCT
Arg
>WENV180322216
OBKR01001624
405393
Bacillota
GCC
Gly
>WENV180322208
OBKR01001599
405393
Bacillota
GCC
Gly
>WENV180321785
OBKR01000454
405393
Bacillota
GCC
Gly
>WENV180323600
OBKR01047740
56074
Bacillota
TGA
Ser
>WENV180322413
OBKR01002659
482078
Bacillota
CCC
Gly
>WENV180324042
OBKR01130871
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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