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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180394080
OBPR01057859
285571
Actinomycetota
GGC
Ala
>WENV180394169
OBPR01085335
282623
Actinomycetota
TTT
Lys
>WENV180393847
OBPR01015019
281115
Actinomycetota
>WENV180393708
OBPR01002008
291869
Actinomycetota
TGC
Ala
>WENV180394154
OBPR01080560
289357
Actinomycetota
CTC
Glu
>WENV180393742
OBPR01004941
399483
Actinomycetota
CTG
Gln
>WENV180393826
OBPR01013239
480992
Actinomycetota
CCC
Gly
>WENV180393789
OBPR01008501
184189
Actinomycetota
GAT
Ile
>WENV180394137
OBPR01074345
289686
Actinomycetota
GTG
His
>WENV180393760
OBPR01006556
281008
Actinomycetota
GCC
Gly
>WENV180394093
OBPR01061838
281008
Actinomycetota
GCC
Gly
>WENV180393707
OBPR01002008
176165
Actinomycetota
GAT
Ile
>WENV180393723
OBPR01003104
281661
Actinomycetota
TAC
Val
>WENV180393853
OBPR01015746
101026
Actinomycetota
TGA
Ser
>WENV180393842
OBPR01014300
56310
Actinomycetota
GGA
Ser
>WENV180393984
OBPR01032757
56310
Actinomycetota
GGA
Ser
>WENV180394191
OBPR01093000
185273
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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